Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00017 ATGGCGGAATCGAAGAAAAACGACATCGTTCATTCACCGCTCGTCACATACGCTTCCATGATTTCTCTTCTCACACTCTGTCCTCCTTTCGTAATTCTACTATGGTATACAATGACGGTTGCGGATGGATCGGTTTTCAACACTTTTCATTACTTTAGGAGTAACGGTTTTCAAGGTTTTGTTGATTTGTGGCCTAAACCTACTCTTCTCGCTTGCGAAATTATCGCTGTTTATGGTGTTTTTGAAGCCGTGCTTCAGCTTCTTCTTCCTGGTAAAACTGTTTACGGTCCTATTTCTCCCACTGGCAATCGTCCTGTTTATAAGGCGAATGGTGTTGCTGCGTATTTAGTCACTTTGGTTACTTATGTTGCTCTTTGGTGGTTTGGGATATTCAACCCTACAATCGTTTATGATCATTTGGGAGAGATATATTCAACACTCATCTTTGGGAGCTTAATCTTTTGTATTTTCTTATACATAAAAGGTCATTTGGCACCATCTTCTTCTGATTCTGGCTCATCTGGGAACATAATCATCGATTTTTATTGGGGTTTGGAGCTCTATCCACGCATTGGAAAATATTTTGACATAAAAGTTTTCACAAACTGCAGATTTGGAATGATGTCATGGGCTGTTCTTGCACTTACCTACTGCATAAAGCAGTATGAAGAAAATGGGAAAGTAGCTGACTCAATGCTTGTAAATACTACACTGATGCTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATACTGGAACACAATGGATATTGCACATGATCGAGCTGGATTTTATATTTGCTGGGGCTGTTTGGTTTGGGTTCCCTCCGTGTATACGTCTCCTGGAATGTACCTTGTCAACCATCCAGTAAATCTTGGCACCCAGCTAGCACTCTTTATTTTAGTGGCCGGCATTCTGTGCATATACATCAACTATGATTGTGACAGGCAAAGGCAAGAGTTTCGTAGGACAAATGGAAAAGGCTTGGTCTGGGGAAGAGCTCCATCAAAGATAGAGGCCTCATATACTACTACTTCTGGGGAAACAAAAAAAAGTCTTCTTTTAACCTCTGGATGGTGGGGGTTAGCGCGTCATTTTCATTATGTCCCTGAAATACTAGCTGCATTCTTCTGGACTGTCCCAGCTCTTTTCAGTCATTTTTTGCCTTACTTCTACGTGATATTTCTCACCATCCTTCTTTTTGATCGAGCCAAAAGGGATGACGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTCTATTGTGACAGGGTACCTTACAGAATCATTCCAGGAATATATTGA 1314 0.4125 MAESKKNDIVHSPLVTYASMISLLTLCPPFVILLWYTMTVADGSVFNTFHYFRSNGFQGFVDLWPKPTLLACEIIAVYGVFEAVLQLLLPGKTVYGPISPTGNRPVYKANGVAAYLVTLVTYVALWWFGIFNPTIVYDHLGEIYSTLIFGSLIFCIFLYIKGHLAPSSSDSGSSGNIIIDFYWGLELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVAGILCIYINYDCDRQRQEFRRTNGKGLVWGRAPSKIEASYTTTSGETKKSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFSHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDRVPYRIIPGIY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00017 437 Gene3D - 226 436 - -
Vivi5g00017 437 PANTHER DELTA(14)-STEROL REDUCTASE 5 437 - -
Vivi5g00017 437 Pfam Ergosterol biosynthesis ERG4/ERG24 family 70 437 IPR001171 GO:0016020|GO:0016126|GO:0016628
Vivi5g00017 437 ProSitePatterns Sterol reductase family signature 2. 401 424 IPR018083 GO:0016628
Vivi5g00017 437 ProSitePatterns Sterol reductase family signature 1. 175 190 IPR018083 GO:0016628
Vivi5g00017 437 FunFam Putative 7-dehydrocholesterol reductase 227 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00017 Vivi-Chr5 195213 200443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00017 8 437 Miscellaneous Gene Families AT1G50430 84.651 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00017 K00213 - gmx:102659420 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00017 5 195213 200443 Vivi5g00017 5 195213 200443 ECH