Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00007 ATGAGGAGAGAGATCAGAGAAGAGAGAGATATGTCACAAAAACCGGTTTACGTAAAACAGTCTATAGGCGTTAATGGCTTAGAGAAGATCATTCTTAAAGAAGTTCGTGGCTTCTCCGCTGAGGTGTATTTATACGGAGGACAGGTTACATCCTGGAAAAATGAACGTGGAGAAGAATTACTATTTGTTAGTAGTAAGGCTAATTTTAATCCTCCGAAATCAATACGCGGAGGCATTCCAATATGTTTTCCTCAATTCTCAAATCTTGGTTCTCTTGACCATCATGGATTTGCAAGGAACAAGTTGTGGACCTTAGATCCTAATCCTCCTCCATTTCCAACAAACAGCACTAGTAGAGCTTTCATTGATTTGATTCTTAAAAACTCTGAAGACGATTCAAAGAATTGGCCTCATAGATATGAGTTTCGCCTAAGGATAGCTTTGGGACCTACAGGAGATCTGATGATGACCTCCCGAATTCGAAATACAAATAAAGATGGAAAATCGTTTACCTTCACATTTGCCTATCATACATATCTCTATGTTACCGATATCAGTGAAGTTCGAATAGAAGGACTAGAGACATTGGATTATCTAGACAATTTGAAGAATAGGCAACGATTTACAGAACAAGGAGATGCTATAACATTCGAGTCTGAAGTGGACAAAGTGTACGTAAGCACTCCCACAAAAATTGCTATCATAGACCATGAAAGGAAGAGAATTTTTGAAGTGCGAAAAGACGGGCTTCCTGATGCTGTGGTATGGAATCCGTGGGACAAGAAAGCGAAAACCATATCTGATTTAGGGGATGACGAGTACAAACACATGTTATGTGTTCAATCTGCTTGTGTAGAAAAAGCAATCACTCTCAAACCTGGCGAAGAGTGGAAAGGAAGACAAGAAATATCCGCGGTTCCTTCAAGTTATTGTAGTGGTCAACTCGATCCTCGAAAAGTACTTTTCCAGTATTAG 975 0.3949 MRREIREERDMSQKPVYVKQSIGVNGLEKIILKEVRGFSAEVYLYGGQVTSWKNERGEELLFVSSKANFNPPKSIRGGIPICFPQFSNLGSLDHHGFARNKLWTLDPNPPPFPTNSTSRAFIDLILKNSEDDSKNWPHRYEFRLRIALGPTGDLMMTSRIRNTNKDGKSFTFTFAYHTYLYVTDISEVRIEGLETLDYLDNLKNRQRFTEQGDAITFESEVDKVYVSTPTKIAIIDHERKRIFEVRKDGLPDAVVWNPWDKKAKTISDLGDDEYKHMLCVQSACVEKAITLKPGEEWKGRQEISAVPSSYCSGQLDPRKVLFQY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00007 324 Gene3D - 25 310 IPR014718 GO:0030246
Vivi5g00007 324 Pfam Aldose 1-epimerase 30 303 IPR008183 GO:0005975|GO:0016853
Vivi5g00007 324 SUPERFAMILY Galactose mutarotase-like 23 303 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vivi5g00007 324 CDD D-hex-6-P-epi_like 37 304 IPR025532 -
Vivi5g00007 324 PIRSF PHexose_mutarotase 10 311 IPR025532 -
Vivi5g00007 324 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 20 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00007 Vivi-Chr5 150452 152640 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00007 K01792 - gmx:100784457 563.918