Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05761 ATGAAATTGAAGTCTAAGAAAGGATGGAAATCCATTGTACCTCTTCATTTAAAAGGAAAATCTGTGACTCGTTTTTCGTTATTTCGCAAAGTAAATTCAGCTAGCCATGGACCTGGAAAAACTCCTGTTTATCTCAATGTGTATGACTTGACACCGATGAACGGTTATGTGTATTGGGCCGGTCTTGGTATCTATCACTCTGGTATCGAAGTTCATGGTGTGGAATATGCATTTGGAGCTCATGACTACTCAACAAGCGGTGTTTTTGAGGTGGAACCCCGACAATGTCCAGGCTTCAAGTTCAGGAAGTCGATATTCATCGGAACTACATCATTAGATCCTGGTCAAGTTAGGGAGTTCATGGAATGCGAGTCAGCAAGCTACAACGGCGACACGTATCACTTAATTGCTAAGAACTGCAATCACTTCTGCAAAGACATCTGCTACAAGCTGACAGGAAAAGCAATTCCAACTTGGGTAAATCGGCTAGCCAGGCTAGGTTCGATTTGCAACTGCATTCTACCAGAAGCATTAAGAATTGCTGCTGTAGGGCATGATCCTAACCATGAAACTCAGGATAGTGAAAAGAGAAAGCTAAGAAGTGCTTTCAATTCGTTGTCTTCAATTTCAATGCGTCAAAAGCAGTTATCTAAGTCTTCGTTGTTTCTACAATCCCCCTTAAGAGGTTGCTTATCGTCGAAGTGGCCATCATGGGAATTGAGCAAGTCTATTAATCGATCAGTCAAAGAAAGGTAA 756 0.4167 MKLKSKKGWKSIVPLHLKGKSVTRFSLFRKVNSASHGPGKTPVYLNVYDLTPMNGYVYWAGLGIYHSGIEVHGVEYAFGAHDYSTSGVFEVEPRQCPGFKFRKSIFIGTTSLDPGQVREFMECESASYNGDTYHLIAKNCNHFCKDICYKLTGKAIPTWVNRLARLGSICNCILPEALRIAAVGHDPNHETQDSEKRKLRSAFNSLSSISMRQKQLSKSSLFLQSPLRGCLSSKWPSWELSKSINRSVKER 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05761 251 Gene3D PPPDE domains 37 191 IPR042266 -
Vivi4g05761 251 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Vivi4g05761 251 PANTHER DESUMOYLATING ISOPEPTIDASE 39 220 IPR008580 GO:0008233
Vivi4g05761 251 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Vivi4g05761 251 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05761 Vivi-Chr4 194056442 194058217 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05761 K22763 - gmx:100788399 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05761 4 194056442 194058217 Vivi4g05761 4 194056442 194058217 ECH