Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05686 ATGGGTGAAACTGATAACCACCACCACCACCACCAAGCACCACCGCCAGTTCAGGCACCACCACCGCAGAATCTGGGACTTTCAAGAGGACCTACTTGGACTCCAGCTGAACAGCTTCTTCAACTTCATTATTGCATCCATTCTAATCCTTCATGGCCGGAAGCATTACTTTTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACGGTTCTGATTGCCACCAATCTTGTACCTCAAATGGGTGGGAGTCATGGCGATAAGGCTCGTGTGATTCAGACATTGTTGTTTATGTCTGGCATCAACACATTGCTTCAGACTTGGTTTGGTTCGAGGCTTCCAGTAGTTATGGGCGGATCACTTGCTTTCGTACTCCCAGTGATGTCGATCATCAATGATTACAATGACCAGACTTTTTCATCTGAGCATGAGAGGTTTACTCGCACAATGAGAACAATTCAAGGATCCCTCATTGTTTCATCTTTCATCAATATCTTCCTTGGATATAGTAGGGCATGGGGAAATTTAACAAGGTTGTTTAGTCCCATTATCATTGTACCTATAGTAGCTGTGGTCGGTCTCGGTCTATTCACGAGGGGCTTTCCGCTGGTTGCAGATTGTATCCAAATTGGACTGCCTATGCTCATTCTCCTGATCATAACACAACAGTATTTGAAGCGCCTTCATCCTCAAGCTCATCATATACTTGAGAGGTTTGCTTTACTAATCTGCATTGCCATTATTTGGGCTTTCGCCGCAATCCTTACCGTTGCTGGTGCATACAATAATTCCAAATCAAAGACCCAAACGAGTTGCCGCACAGATCGCTCCTACCTTTTGACTTCTGCTCCTTGGATTAAAGTTCCATACCCATTTCAGTGGGGTACCCCCATATTCAAGGCTAGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCACTTCTGCTGAGTCAACTGGTACTTACTTTGCCGCAGCCAGGCTTTCTGGTGCAACACCCCCTCCTGCACACGTGTTCAGCCGAAGCATTGGACTCCAGGGTATTAGCATGCTGATTGAAGGCATTTTTGGTTCTGTTGTTGGTACTACAGCATCCGTCGAAAATGTTGGTCTACTTGGTCTCACTCATATCGGGAGCAGAAGAGTGGTGCAAATATCATGTGGTTTCATGATTTTCTTCGGTAAATTCGGCGCCTTTTTTGCATCGATTCCCCTACCCATATTTGCTGCTATATACTGTGTTTTATTTGGCATTGTTGCTGCTACTGGGATCTCATTCATACAATTTGCAAACAACAATTCCATAAGAAATATCTATGTTTTCGGCTTAACCCTATTTCTCGGAATCTCAATTCCTCAATATTTTATCATGAACACCGCACCTGACGGTCACGGTCCTGTTAGAACAAACGGTGGATGGTTTAATGACATATTGAACACAATATTCTCATCTCCACCAACTGTGGCAATAATAGTTGGAACTGTTATTGACAACACACTTGAAGCAAAACAAACAGGTGTTGATAGAGGACTTCCATGGTGGGTTCCTTTCCAGAATAGGAAGGGAGATGTTAGAAATGACGAATTTTATCGCTATCCGCTTAGGTTAACTGAATATATTCCTACCAGATTTCTAGATTAA 1641 0.4363 MGETDNHHHHHQAPPPVQAPPPQNLGLSRGPTWTPAEQLLQLHYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATNLVPQMGGSHGDKARVIQTLLFMSGINTLLQTWFGSRLPVVMGGSLAFVLPVMSIINDYNDQTFSSEHERFTRTMRTIQGSLIVSSFINIFLGYSRAWGNLTRLFSPIIIVPIVAVVGLGLFTRGFPLVADCIQIGLPMLILLIITQQYLKRLHPQAHHILERFALLICIAIIWAFAAILTVAGAYNNSKSKTQTSCRTDRSYLLTSAPWIKVPYPFQWGTPIFKASHVFGMMGAALVTSAESTGTYFAAARLSGATPPPAHVFSRSIGLQGISMLIEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISCGFMIFFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFIQFANNNSIRNIYVFGLTLFLGISIPQYFIMNTAPDGHGPVRTNGGWFNDILNTIFSSPPTVAIIVGTVIDNTLEAKQTGVDRGLPWWVPFQNRKGDVRNDEFYRYPLRLTEYIPTRFLD 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05686 546 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 25 541 - -
Vivi4g05686 546 NCBIfam purine/pyrimidine permease 56 451 - -
Vivi4g05686 546 MobiDBLite consensus disorder prediction 1 30 - -
Vivi4g05686 546 Pfam Permease family 55 455 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05686 Vivi-Chr4 193176771 193181049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05686 35 541 Organic Solute Cotransporters AT2G34190 57.255 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05686 - - gmx:100777184 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05686 4 193176771 193181049 Vivi4g05686 4 193176771 193181049 ECH