Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05603 ATGCGTGATTTAGGGTTTCACGAACAACGAAGATCCTGGAGGCGCACCGGTTCAACACGACGCAACGCCACCACTACCACCTCCACTACCGCCGCCGCCGGTGACACTAGTCCTGACTCCGTCATCTTCACTCTCGAATCTAACGTCAGTCTCTTCTCCTCCGCTTCCGCCAGCGTCGATCGCTGTTCCTTCGCTTCCGATGCTCACGACCACGACTCTCTGAACTCCGAAATCTCACTGCATTTGGCCGGGAACGGTGATTTTGCTCCGAGTGAAAGCTGGAGCGGTCCAGATCCGGATCCGAATCCGAATCTGAATGCGAACAAACAACATCATGCAGTTGCAGATACAGTACAGAAAAAGAAGCTTCACGGAGATAAAACAAAAGTTCAAAAGGAAGAAAGTGACGTTGACACTGAAGAAGACGGTAATCAACTCTCGGAATTTGATTCTGCGAGAAACTCTTTCTCTCTAGCTCTCAAAGAATGTCAAGATCGTAGATCGAGATGTGAAGCTTTATTTAAGAAGCAAGATAGGCGAAGACCTGCTTCATTAGATCTGAATAATGGCAATGCTATTGGAACTGTTTCTTCGCCTCGTTTGGGAATTGGAGCTATGAAGAAGAGTACGCTTCCGTCTAGGAAATCTGGAACTGGAACTGGCACTTTTCCGAGTCCTGGAACTCCGAACTATCGACACTGTCAGGGTGGTGTTGCAATGCAAAAGGGTTGGAGTTCTGAGAGAGTTCCTTCGAGTGGGGTCCGCAAGCAAGTTGGTAATGGTGCGGCTGCATTGTGTTTAAGTAATGGGAGAACGTTGCCGTCTAAGTGGGAAGATGCTGAGAGGTGGATTTTGAGTCCTGTTTCGGGGGATACAGCTGGAAGGGCTTTGGTTCCCCAGCCGCTGAGGAGGCCAAAGTCGAAGAGTGGTCCTCTTGGTCCACCTGGTGTTGCGTATTATTCGTTGTATTCTCCTGCAGGTCATTATTTTGATGGAGGGAGTTTTATGTCAGCTTCACCTTTTTCTGCTGCTGTTAATGCTTCAGCTGATGGGTTTACAAATAGTTCTGGGGGCAACGGTGGAGTGCTTCCCGCACGAACAGATCCTTGCATGGCTCGCTCTGTCAGTGTACATGGCTGCTCTCAGATGCAGGGAGAGTCGTCAATTCCTACCCGAGAAGAAAAGTTCGATAGTTTCAAGGATGCAGGCACCAATGTATCTCCCGCTGTTTCAAGGAGGGACATGGCTACCCAGATGAGCCCCGAGGGAAGTTCATGCTCCTCTCCCAATAGGAGGACTTCTTTCTCTGCTTCCACCCCCCCTGCCCTGCCTGTCACTGAGTTGCAGAGTGCCTCTCTCTCTAAAATGGATATCAGGGATGTGCAGGTAGATGAGCGTGTAACCATGACAAGGTGGTCCAAGAAACACAGGGCCTTATTCATTGGAAGAGGTTCAGAGAGTGTTGACAGCTGGAAAAAGAAAGAAACAAGCACTCGATCTACATCTTGGGAAATTTCTGAAAGCTCAAAGACTATTTCAAAGGCTAAAAGGGAGGAAGCCAAAATTACTGCATGGGAGAACTTGCAAAAGGCGAAAGCTGAGGCAGCAATACGAAAACTGGAGATGAAGCTAGAAAAGAAGCGAGCATCTTCCATGGACAAGATTATGAACAAACTGAGATTCGCTCAGAAAAAGGCTCAAGAAATGAGGGGTTCAGTTCTAGACAACCAGGCTCATCAAGTTGCCAGAACTCCTCACAAAGTTATGTCATTTCGGAGAGCCAGCCAGATGGGTTCTTTGAGTGGTTGTTTCACCTGTCACGCCTTTTAA 1830 0.4836 MRDLGFHEQRRSWRRTGSTRRNATTTTSTTAAAGDTSPDSVIFTLESNVSLFSSASASVDRCSFASDAHDHDSLNSEISLHLAGNGDFAPSESWSGPDPDPNPNLNANKQHHAVADTVQKKKLHGDKTKVQKEESDVDTEEDGNQLSEFDSARNSFSLALKECQDRRSRCEALFKKQDRRRPASLDLNNGNAIGTVSSPRLGIGAMKKSTLPSRKSGTGTGTFPSPGTPNYRHCQGGVAMQKGWSSERVPSSGVRKQVGNGAAALCLSNGRTLPSKWEDAERWILSPVSGDTAGRALVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHYFDGGSFMSASPFSAAVNASADGFTNSSGGNGGVLPARTDPCMARSVSVHGCSQMQGESSIPTREEKFDSFKDAGTNVSPAVSRRDMATQMSPEGSSCSSPNRRTSFSASTPPALPVTELQSASLSKMDIRDVQVDERVTMTRWSKKHRALFIGRGSESVDSWKKKETSTRSTSWEISESSKTISKAKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRFAQKKAQEMRGSVLDNQAHQVARTPHKVMSFRRASQMGSLSGCFTCHAF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05603 609 MobiDBLite consensus disorder prediction 401 443 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 1 15 - -
Vivi4g05603 609 Coils Coil 552 572 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 410 443 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 114 136 - -
Vivi4g05603 609 Pfam Remorin, C-terminal region 495 597 IPR005516 -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 209 230 - -
Vivi4g05603 609 PANTHER OS02G0116800 PROTEIN 255 604 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 211 229 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 87 150 - -
Vivi4g05603 609 Coils Coil 530 550 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 1 38 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 18 38 - -
Vivi4g05603 609 MobiDBLite consensus disorder prediction 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05603 Vivi-Chr4 191866383 191871240 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05603 - - psat:127091358 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05603 4 191866383 191871240 Vivi4g05603 4 191866383 191871240 ECH