Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05413 ATGCTACTACAGTTTCAAAAGCATTGGAGTTTGAAGATGGAAGAGGGTAATGGCGAGAACATTCTAGACGCTCTCTACGAAGATGACAATAACTTGGATGACATTGAGATGCTTGACGTTGAAGAAGGTGAGTTTCTTGATGTTGAAGAAGGGGAATTGGTAGACCATCATCAAAACGGCGTCGTAGCAAAAGATCATAATCTCGTTAACGAAACAGATTGTAATAACAATCAAAAACCAAAATCTCTCAATCGGAATCGCAGACGTAAAGCTAACAAGAGAAAGAAAAAGGGTTTAGGTTCGGATTCTATCAACATTGACAGGTTTGTGAAAGAGACATGCCGGCGATTGAAAGAAAAAAAGTTATATATGGTATACACAGCTGTAGGTTGCCTCGGGATTTCTGCACTGAGCGATCTCGTCAAAGAGGTAGATGCAATCCAGTCTTGTGGAGGCCAAAAGACTGCTGATGGCAAGCGATTTAGGACAGGGGGTGGTGTATTGTGGAACATCATTAAAAATCGAGAACCAAATGCCTACAAAGAGATAATGAATAAAACGAGGGAGTTTGAGAAGCAATTCAGGCAGCTAAGTCATGGTCAGCCACCTATGCAACAAAAGGAGGATTCTTCTCAAGGGGTGCCATGTACATTTTCTAGCAGGCGTCCGGTCAATGTTTCTAACAATACTTCTTGCACAATGCAACTGCAAGATCAGCCTAAAGCACCATGTTCTGAAGAGAAGCGCGTTCCTGTTCACGACAGATTAAGGGTACCTGTTTCCTACGATGATGATCTTCTGCTTGGAACAAGTATCGATAATGATGCAACCTTACTCTGA 840 0.4202 MLLQFQKHWSLKMEEGNGENILDALYEDDNNLDDIEMLDVEEGEFLDVEEGELVDHHQNGVVAKDHNLVNETDCNNNQKPKSLNRNRRRKANKRKKKGLGSDSINIDRFVKETCRRLKEKKLYMVYTAVGCLGISALSDLVKEVDAIQSCGGQKTADGKRFRTGGGVLWNIIKNREPNAYKEIMNKTREFEKQFRQLSHGQPPMQQKEDSSQGVPCTFSSRRPVNVSNNTSCTMQLQDQPKAPCSEEKRVPVHDRLRVPVSYDDDLLLGTSIDNDATLL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05413 279 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 109 189 IPR019385 -
Vivi4g05413 279 Gene3D - 101 198 IPR038092 -
Vivi4g05413 279 MobiDBLite consensus disorder prediction 71 100 - -
Vivi4g05413 279 MobiDBLite consensus disorder prediction 197 222 - -
Vivi4g05413 279 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 29 266 IPR039047 GO:0006408
Vivi4g05413 279 MobiDBLite consensus disorder prediction 198 222 - -
Vivi4g05413 279 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05413 Vivi-Chr4 187908442 187915186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05413 K14291 - gmx:100793038 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05413 4 187908442 187915186 Vivi3g01705 3 27614682 27619936 PCT