Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05407 ATGGCTGATTCAACACCTACCGATTCAGTGTCGGTGGATATGGATTCCATAACTTCTTCTCCTAAGGAACATATTATCAGAACATGCCATGGTTCTGTCTCTGTTGCTGTGTATGGAGACCGGGACAAGCCAGCTCTAATCACTTACCCGGATTTGGGTTTAAATTATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCTGAAGCATATTACTTGCTGCTCCACAATTTTTGCATATATCACATTAGTCCACCTGGGCATGAGTTGGGAGCAGCTAAAATTGATGCAGATTACCCTGTTCTATCCGTAGATGACTTAGCCGATCAAATAGCCGAGGTGCTTAACTTTTTTGGTCTTAATGCAGTTATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTTCTTGGTTTGATACTTGTTTCTCCTCTATGTAAAGAACCGTCTTGGTCTGAATGGCTTTACAACAAGGTCATGTCAAATTTACTATACTTTTATGGCACGTGTGGCGTGGTAAAGGAATTATTACTGAAGCGGTACTTCAGCAAGGAAATTCGCGGGGGTACTAATATATCGGAATCAGATATAGTTAAAGCATGCCGAAGGTCGTTGGGTGAGAGGCAAAGCACGAATGTGTGGAGGTTCCTCGAAGCTATTAATAGGAGACCTGACCTAAGTGAAGGATTGAGAAAATTACATTGCCGGTCTCTAATTTTTGTCGGGGATATGTCTCCGTTTCACTCCGAGGCACTCCATATCACTTCAAAGTTAGACAGACATTATAGCGCCTTAGTTGAGGTTCAAGCATGTGGATCAATGGTAACAGAGGAGCAACCTCATGCTATGTTAATACCAATGGAGTACTTTCTCATGGGATATGGTCTGTACAGGCCATCAAGATTGAGTGTCAGCCCAAGAAGTCCTTTGAGTCCATCTTGCATTTCTCCTGAGCTTTTTTCACCAGAGAGTATGGGTTTGAAATTGAAACCTATAAAAACAAGAATTACTGGGGAAATGTAG 1050 0.419 MADSTPTDSVSVDMDSITSSPKEHIIRTCHGSVSVAVYGDRDKPALITYPDLGLNYVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAAKIDADYPVLSVDDLADQIAEVLNFFGLNAVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGTCGVVKELLLKRYFSKEIRGGTNISESDIVKACRRSLGERQSTNVWRFLEAINRRPDLSEGLRKLHCRSLIFVGDMSPFHSEALHITSKLDRHYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSRLSVSPRSPLSPSCISPELFSPESMGLKLKPIKTRITGEM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05407 349 SUPERFAMILY alpha/beta-Hydrolases 32 300 IPR029058 -
Vivi4g05407 349 Gene3D alpha/beta hydrolase 15 302 IPR029058 -
Vivi4g05407 349 PANTHER N-MYC DOWNSTREAM REGULATED 18 343 IPR004142 -
Vivi4g05407 349 Pfam Ndr family 23 307 IPR004142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05407 Vivi-Chr4 187794182 187799336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05407 - - gmx:100815084 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05407 4 187794182 187799336 Vivi4g05407 4 187794182 187799336 ECH
Vivi4g05407 4 187794182 187799336 Vivi4g05407 4 187794182 187799336 PCT