Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05404 ATGTCTTGTTTTTGCATATCATATTTTTGTCCATTTCTCATCTTCATCTTTTTTCTTCATCTTGCATGCTATTTTCCTTTTGACACCCCCCAAAACATGTCTTCAGAATTATCACACCATGATATCCAAGGTCTAACACAAGAAGAATTCAAAGAACTAGAACCAATCATTAAAAAATACCACATATTAGAACCAACCACAAACACATGCACATCGATCATAACCTACAAAATCGAAGCACCATCAAGCATAGTATGGCCATTCGTACGAAGCTTCGAGAATCCACAAAAATACAAACATTTCATCAAAGGTTGTAACATGAAAGGTGACGGAAACGTCGGTAGCATAAGAGAAGTCACCGTTGTTTCGGGTTTACCGGCCTCCACGAGCACCGAAAGGTTAGAGATTTTGGATGATGAGAAACATGTACTAAGTTTTAGAGTTGTTGGTGGCGAACATCGGCTTCAGAATTATCGATCGGTTACTTCGGTTAATGAGTTTGTTGACAACGAAGGTAAGGTTTATACTATTGTTGTGGAATCTTATATTGTTGATATTCCTCATGGGAACACAGAAGAAGATACCAAGATGTTTGTTGATACTGTTGTGAAGCTTAATCTTCAGAAACTTGGAGTTGTTGCTATGAGTTCATCTTCATCAGATTGCATGGAGAACAATATATAA 684 0.3728 MSCFCISYFCPFLIFIFFLHLACYFPFDTPQNMSSELSHHDIQGLTQEEFKELEPIIKKYHILEPTTNTCTSIITYKIEAPSSIVWPFVRSFENPQKYKHFIKGCNMKGDGNVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLQNYRSVTSVNEFVDNEGKVYTIVVESYIVDIPHGNTEEDTKMFVDTVVKLNLQKLGVVAMSSSSSDCMENNI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05404 227 CDD PYR_PYL_RCAR_like 77 210 - -
Vivi4g05404 227 Pfam Polyketide cyclase / dehydrase and lipid transport 77 210 IPR019587 -
Vivi4g05404 227 SUPERFAMILY Bet v1-like 70 210 - -
Vivi4g05404 227 Gene3D - 30 226 IPR023393 -
Vivi4g05404 227 PANTHER - 67 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05404 Vivi-Chr4 187734595 187735493 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05404 K14496 - gmx:100778183 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04271 7 111403869 111405731 Vivi4g05404 4 187734595 187735493 ECH
Vivi4g05404 4 187734595 187735493 Vivi4g05404 4 187734595 187735493 ECH
Vivi4g05404 4 187734595 187735493 Vivi4g05404 4 187734595 187735493 PCT