Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g05394 | ATGAGGGAAGAAATTAACAACAGCAACCCATCAGAAAACAAGTCCAAAGCTTCGAAATTTTCCGATCAAAACCAACCACCAAAGCTTCAAACTTCCAAAACAAACAACCCCAACAACAATCACTCAAAGCCAAGGCTATGGGGTGCACACATTGTGAAAGGCTTTTCAGCTGACAAGAAAACCAAACAACAATCATCTCTTCCGACAAAAAAACAACAGGCCTCAGATAATGCTAATGCTAATGCTAACCAGAAGAACTCTTTTGTTCCACCTCATTCAAGAGCCAAAAGATCCTTAATGGGTGATTTGTCATGCTCTCAGGTTCATCCACATGCTTTTCCAACGCATAGGAGACAATCATCAACTGATTTGTTCACTGAGCTGGATCATATGAGAAGCTTGTTGCAAGAGTCTAAGGAGAGAGAGAGTAAGCTGAATGCTGAGTTGGCTGAGTGTAGGAAGAATCGGAATGAGGTTGATGAGCTTGTGAAGAAAGTTGCTTTGTTGGAAGAAGAGAAAGCTAGTCTCTTTGAGCAATTGGCTGTGTTGAGTAGGAGCTGTGGATTGGAGAGACAAGGGGAGGTGGTGAAAGGGGGGAATGAGGATAGTTCTGTGCAGAATCTTGAGCTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAGGAGCTGCATATGCAGAAGAGGAACCTCACTTGCAGGCTTTCTTCTATGGAGTCTGAGTTGTCTAGTTCTGCAAACTCTTCAGAGAGTGACATTGTTGCCAAATTCAAAGCCGAGGCGTCATTGCTCCGGCTCACCAACGAAGACCTGAGTAAACAAGTAGAAGGTTTACAAACAAGCAGATTAAATGAAGTAGAGGAGCTTGCATACTTGAGGTGGGTGAATTCGTGTTTACGAACCGAGTTGAAGAATACATGCTCAACATTGGATTCTGATAAGCCATCTAGTCCTGAATCTGTTGTGAGTAGTAGTGGAGATTCTATTGCTTCTTTCTCCGATCAATGCGGTAGTGCAAATAGGTTCAATTTGGTTAAGAAGCTGAAAAAGTGGCCAATAACTAGTAGTGATCATTCATCACAAGTTGAGTCCACAAGTAGTACTAGTAGTCTCTTTGAGAAAAATTGGATTGAATCAATATCTGAAGGAAGCAATAGAAGAAGACATTCGATTAGTGGTTCCAATAGCTCGGAGGAAGATGTTGTTGTATTGAATAAAAGAAGACAATCTAATTGTTTTGATTCCCTTGAATGTTTAAAAGAAATCGAAAAGGAATCGGTGCCATTACCGTTGATTGTTCAGCAATCTGTTATGGAGAAGAGGCCACTGAGGATTCCCAATCCTCCTCCAAGACCTTCTTCATGTTCTATTTCTAGCAAAACAAAACAAGAAAACCCGGCTCAAGTTCAAGTTCAACCTCCTCCACCTCCGCCTCCTCCACCACCTCCTATGAGTTTTGCATCGAAAAGTAACACGGCAATGGTAAAAAGAGCGCCACAAGTGGTGGAATTGTACCATTCACTCATGAAGAGAGATTCTAGAAAGGATTCTTCAAACGGAGGACTCGCTGATGCCCCTGATGTTGCAGATGTTCGTAGTAGCATGATTGGAGAAATTGAGAACCGTTCTTCGCATTTACTTGCTATAAAGGAAGATATCGAAACACAAGGAGAATTTGTGAATTCACTGATTAGAGAGGTGAAGAGTGCGGTTTATCAGAACATTGATGATGTTGTAGCATTTGTGAAGTGGCTTGATGATGAACTTTGCTTCCTTGTGGACGAAAGGGCCGTCCTTAAACATTTTGATTGGCCGGAGAAAAAAGCCGACACATTAAGAGAAGCATCATTTGGATACCAAGATTTGAAAAAATTGGAATACGAAGTTTCCTCCTACAAGGACGATCCTCGACTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCTTTATCAGAAAAGATGGAACGCACGGTATATGCTCTTCTCCGCACAAGGGACTCACTAATGCGGAATTGCAAGGAGTTTCAAATTCCTGTAGAATGGATGCTTGATAATGGAATCATTGGCAAGATAAAACTAGGGTCAGTTAAATTGGCCAAAAAGTATATGAAAAGGGTAGCCATGGAAGTTCAAACAAAGTCAGCATTTGACAAAGATCCTGCAATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCAGGAGGATTTGATGCAGAAACAATGCACGCGTTTGAGGAACTTCGTAATCTTGCTTCTCTACTAAACAAGACATGA | 2289 | 0.4137 | MREEINNSNPSENKSKASKFSDQNQPPKLQTSKTNNPNNNHSKPRLWGAHIVKGFSADKKTKQQSSLPTKKQQASDNANANANQKNSFVPPHSRAKRSLMGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRSLLQESKERESKLNAELAECRKNRNEVDELVKKVALLEEEKASLFEQLAVLSRSCGLERQGEVVKGGNEDSSVQNLELEVVELRRLNKELHMQKRNLTCRLSSMESELSSSANSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKPSSPESVVSSSGDSIASFSDQCGSANRFNLVKKLKKWPITSSDHSSQVESTSSTSSLFEKNWIESISEGSNRRRHSISGSNSSEEDVVVLNKRRQSNCFDSLECLKEIEKESVPLPLIVQQSVMEKRPLRIPNPPPRPSSCSISSKTKQENPAQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDSRKDSSNGGLADAPDVADVRSSMIGEIENRSSHLLAIKEDIETQGEFVNSLIREVKSAVYQNIDDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLEYEVSSYKDDPRLPCDIALKKMVALSEKMERTVYALLRTRDSLMRNCKEFQIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT | 762 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 10 | 43 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 381 | 400 | - | - | |
| Vivi4g05394 | 762 | Coils | Coil | 205 | 239 | - | - | |
| Vivi4g05394 | 762 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 471 | 481 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 58 | 91 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
| Vivi4g05394 | 762 | Coils | Coil | 128 | 186 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 438 | 486 | - | - | |
| Vivi4g05394 | 762 | PANTHER | PROTEIN CHUP1, CHLOROPLASTIC | 49 | 754 | IPR040265 | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 384 | 398 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 467 | 484 | - | - | |
| Vivi4g05394 | 762 | MobiDBLite | consensus disorder prediction | 452 | 466 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi4g05394 | Vivi-Chr4 | 187629534 | 187633338 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g05394 | - | - | mtr:11411533 | 1146.34 |