Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05391 ATGGAACGTGCTCGCAGACTCGCAAACCGTGCAACTCTGAAGCGTCTTCTCTCAGAGGCGAAACAGAATCGGAAGAATGAATCAACAACAACAACACCTGTTCCGTTTTCACTCTCTGGTTCTGGTTCATCCTCAAGGTACGTTTCCTCTGTTTCAAACTCTGTTTTCAGAGGCAGAGGATCCAAACCAGACAACAACGTTTCACGACGTGTTGGTGGTGTTGGTGGATTTCTCGGTGTCGGTTATCCATCACAATCTCGATCCATCTCCGTTGAAGCGTTGAAACCGAGTGACACATTTCCGAGACGCCATAACTCAGCTACGCCAGATGAACAAACGAAAATGGCTGAATCTGTTGGTTTCGATAACCTTGATTCACTGGTGGATGCAACAGTGCCGAAATCGATTCGGTTGAAGGAAATGAAGTTCAATAAATTTGATGGTGGATTGACAGAAGGTCAGATGATTGAACACATGAAGGATTTAGCATCGAAGAACAAGGTTTTCAAATCGTATATTGGTATGGGATACTATAACACTCATGTTCCTCCTGTGATTTTGAGGAACATCATGGAGAATCCTGCTTGGTATACACAGTATACGCCTTATCAAGCTGAGATATCGCAAGGTCGTCTTGAATCTTTGTTGAATTTTCAGACCATGATTACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCGTTGCTTGATGAAGGTACTGCTGCTGCGGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTAAGAAGAAAACTTTCATTATTGCTAGTAATTGTCATCCACAGACCATTGATATATGTCAGACGAGAGCCGATGGATTTGAGCTCAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAAGGTGAGGTTTTGGATTATGGTGAGTTTATTAAGAAGGCTCACGCGAATGAGGTTAAGGTTGTTATGGCGAGTGATCTGTTGGCATTGACTGTGTTGAAGCCTCCGGGTGAGTTTGGAGCTGATATCGTTGTTGGTTCGGCTCAGAGATTTGGTGTTCCGATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCGCAAGAGTATAAGAGGATGATGCCTGGAAGAATCATCGGTGTTAGTGTTGATTCTTCTGGAAAGCAAGCTTTGAGGATGGCTATGCAAACTAGGGAGCAGCATATCCGTAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGGACCTGAAGGCCTTAAAGCCATTGCACAAAGGGTTCATGGTCTTGCTGGGGTGTTTGCTCTTGGGTTAAAGAAACTTGGGTTCGAAGTTCAGGATCTTGGCTTCTTCGATACTGTGAAGGTTAAGACTTCAAATGCCAAAGCAATTTCAGACGCTGCTATCAAAAGTGAAATCAATTTGCGTGTTGTAGATGGAAACACTATCACTGCTGCTTTTGATGAAACAACCACTTTGGAGGATGTTGATAAGCTTTTCAAAGTTTTCGCTGGTGGCAAGCCTGTCTCATTCACAGCTGCATCTCTTGCACCAGAATTTCAGAACGCAATTCCTTCTGGATTAGTTAGGGAGAGTCCCTATTTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTGAGATACATTCATAAGCTACAATCAAAAGATCTCTCACTTTGCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTACCGATTTGCACCCTTTCGCACCAACTGAACAGGCTCAAGGATATCAGGAAATGTTCAGCAATTTGGGTGACCTGTTGTGTACCATTACTGGATTTGACTCCTTCTCTTTGCAACCAAATGCCGGTGCTGCTGGAGAATATGCCGGACTCATGGTTATTCGTGCATATCATGTGTCAAGAGGTGACCACCACCGCAATGTTTGCATTATACCAGCATCAGCACATGGTACAAATCCTGCTAGTGCTGCCATGGTTGGAATGAAAATTGTTACCATAGGAACTGATGCTAAGGGAAACATTAACATTGAAGAGTTGAAGAAGGCTGCTGAAAAACATAAGGACAACTTATCTGCGTTTATGGTTACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATTATCCATGATAATGGTGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTTAATCTCCATAAGACATTTTGCATTCCTCACGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCCGTGGTGGCAACTGGTGGAATTCCTTTACCTGAAAATCCTCAACCACTTGGTAGTATCTCAGCTGCACCTTGGGGATCAGCACTCATATTGCCAATCTCTTACACATACATAGCCATGATGGGTTCTCAAGGACTCACCGACGCGTCAAAGATAGCCATTTTGAATGCAAACTACATGGCGAAACGATTGGAGAGCTATTACCCAGTTCTTTTCCGCGGAGTCAACGGAACAGTTGCTCATGAATTCATTATTGACTTGAGAGGATTTAAGAATACTGCTGGAATTGAGCCTGAAGATGTTGCGAAACGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTGGCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTATTGTGATGCTCTTATTTCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAATGCTGATGTTCACAACAATGTTCTCAAGGGAGCCCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACCAAACCATACTCCAGGGACTATGCAGCCTTCCCTGCTGCATGGCTCCGTGGTGCCAAGTTTTGGCCTACCACAGGACGTGTTGATAATGTGTACGGTGACCGCAACCTGGTTTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAACAAGCTGCTGCAACTGCATAA 3180 0.4412 MERARRLANRATLKRLLSEAKQNRKNESTTTTPVPFSLSGSGSSSRYVSSVSNSVFRGRGSKPDNNVSRRVGGVGGFLGVGYPSQSRSISVEALKPSDTFPRRHNSATPDEQTKMAESVGFDNLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKDLASKNKVFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICQTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGFEVQDLGFFDTVKVKTSNAKAISDAAIKSEINLRVVDGNTITAAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEFQNAIPSGLVRESPYLTHPIFNTYQTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDLHPFAPTEQAQGYQEMFSNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHVSRGDHHRNVCIIPASAHGTNPASAAMVGMKIVTIGTDAKGNINIEELKKAAEKHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVATGGIPLPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGTLMIEPTESESKAELDRYCDALISIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSRDYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLPASQAVEEQAAATA 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05391 1059 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 610 849 - -
Vivi4g05391 1059 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 94 1050 IPR003437 GO:0004375|GO:0006544
Vivi4g05391 1059 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 85 1049 IPR020581 GO:0004375|GO:0006546
Vivi4g05391 1059 MobiDBLite consensus disorder prediction 1 47 - -
Vivi4g05391 1059 SUPERFAMILY PLP-dependent transferases 103 528 IPR015424 -
Vivi4g05391 1059 NCBIfam aminomethyl-transferring glycine dehydrogenase 103 1043 IPR003437 GO:0004375|GO:0006544
Vivi4g05391 1059 Gene3D - 183 443 IPR015421 GO:0003824
Vivi4g05391 1059 Gene3D - 610 840 IPR015421 GO:0003824
Vivi4g05391 1059 Gene3D Aspartate Aminotransferase, domain 1 172 524 IPR015422 GO:0003824
Vivi4g05391 1059 SUPERFAMILY PLP-dependent transferases 546 1044 IPR015424 -
Vivi4g05391 1059 Gene3D Aspartate Aminotransferase, domain 1 858 997 IPR015422 GO:0003824
Vivi4g05391 1059 MobiDBLite consensus disorder prediction 23 47 - -
Vivi4g05391 1059 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 859 997 - -
Vivi4g05391 1059 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 183 443 - -
Vivi4g05391 1059 Pfam Glycine cleavage system P-protein 103 528 IPR020581 GO:0004375|GO:0006546
Vivi4g05391 1059 Pfam Glycine cleavage system P-protein 545 821 IPR020581 GO:0004375|GO:0006546
Vivi4g05391 1059 CDD GDC-P 571 966 IPR020581 GO:0004375|GO:0006546
Vivi4g05391 1059 FunFam Glycine cleavage system P protein 436 524 - -
Vivi4g05391 1059 CDD GDC-P 152 528 IPR020581 GO:0004375|GO:0006546
Vivi4g05391 1059 Coils Coil 718 738 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05391 K00281 - gmx:100777528 1880.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05391 4 187606547 187612283 Vivi4g05391 4 187606547 187612283 ECH
Vivi4g05391 4 187606547 187612283 Vivi4g05391 4 187606547 187612283 PCT