Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05378 ATGGAACAAGGAGATATACCCGAGGATGCTAACGAGCATTGCCCAGGTCCTCAGTCTGATTCTGCTGGAAAATCTGATGCATGTGAAGGATGCCCAAGTCAGGAAATTTGTGCCACTGCCCCTAAAGGACCTGACCCTGATTTGGTTGCCATTGCAGAAAGAATGGCGACTGTGAAACATAAGATATTGGTCTTATCAGGAAAAGGAGGTGTTGGCAAGAGCACATTTTCCGCACAGCTAGCATTTGCTTTAGCTGCAAGGGATTTTCAAGTTGGTCTTCTTGATATTGACATTTGTGGTCCAAGCATCCCAAAGATGCTTGGTCTAGAAGGTCAACAGGTACACCAGAGCAACCTTGGGTGGTCTCCTGTCTATGTGGAGTCTAATCTTGCAGTCATGTCGATTGGGTTCTTGCTTTCTCATCCAGATGAAGCTGTTATATGGAAAGGTCTTCGCAAAACTCGGATTATCAAGCAGTTTTTGAAAGATGTTTATTGGGATGAACTTGACTTTCTAATTGTTGATGCCCCACCTGGAACATCTGATGAACAAATTTCAATTGTTCAATGCCTAGATCCAAATAATGTAGATGGTGCAATCATAGTTACCACTCCTCAACAAGTCTCTCTCATTGATGTGAAAAAAGAAGTGAATTTTTGCAAGAAAGTTGGAGTGAAAGTTCTAGGGGTTGTAGAGAATATGAGTGGCCTGTTCCAGCCTATCTCAAATCTCAAGTTTATGAAGATTACAGATAATGGTGAGATGAAAGATGTTACAGAGTGGATATCGGAATACATGAGAGAAAAAGCTCCTGAAATGCTGAATCTAATTGCCTGCAGTGAAGTATTTGATAGTAGTGGCGGGGGAGCGTTGAAGATGTGCAAGGAGATGAAGGTACCCTTTCTTGGTAAGGTTCCTTTAGATCCGCAGCTTTGCAAGGCAGCTGAAGAAGGTAGATCATGTTTTGCCGATAAAGATTGTGCTGTGAGTGCTCCGGCGTTACAAAAGATAATAGATAAGTTGATGGAAACTATTGGGTTGTCAATGACAGTAAGTAATGGAATGTAG 1068 0.4213 MEQGDIPEDANEHCPGPQSDSAGKSDACEGCPSQEICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQQVHQSNLGWSPVYVESNLAVMSIGFLLSHPDEAVIWKGLRKTRIIKQFLKDVYWDELDFLIVDAPPGTSDEQISIVQCLDPNNVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLFQPISNLKFMKITDNGEMKDVTEWISEYMREKAPEMLNLIACSEVFDSSGGGALKMCKEMKVPFLGKVPLDPQLCKAAEEGRSCFADKDCAVSAPALQKIIDKLMETIGLSMTVSNGM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05378 355 Hamap Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1]. 7 346 IPR028601 GO:0016226|GO:0051536|GO:0051539
Vivi4g05378 355 Hamap Iron-sulfur cluster carrier protein. 53 342 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vivi4g05378 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 322 IPR027417 -
Vivi4g05378 355 MobiDBLite consensus disorder prediction 1 27 - -
Vivi4g05378 355 Gene3D - 54 350 IPR027417 -
Vivi4g05378 355 PANTHER NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED 9 345 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vivi4g05378 355 Pfam NUBPL iron-transfer P-loop NTPase 58 258 IPR033756 -
Vivi4g05378 355 Pfam NUBPL iron-transfer P-loop NTPase 279 341 IPR033756 -
Vivi4g05378 355 CDD Mrp_NBP35 60 313 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vivi4g05378 355 ProSitePatterns Mrp family signature. 166 182 IPR000808 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05378 Vivi-Chr4 187230551 187271424 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05378 - - gmx:100820246 616.305