Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05370 ATGGCGGAAACTGAACCGTTGCAAAAACCAACCTACATTCCTCTCCAAGAGCTTCAAAAACACAACAAACGCGGCGACGCATGGATCGCCATTGACGGCAAGATCTACGACGTTTCAAAATGGGCCAACCACCACCCCGGCGGCGAGACTCCCCTCCTCAACCTCGCCGGCCAAGACGTTACCGATGCGTTCCTCGCTTTCCACCCTCCCTCCGCCTACAAACGACTGGATGCATTCTTCACCGGGAATTACCTCCGTGATTACACCGTCTCCGAAGTCTCTCGTGATTACCGGAGTTTGTTCTCCGAGCTCACGAAATTAGGGTTGTTCGAAGATAAAGGACACGGTGTTTTGATTTTGCTTTCGTTGATTGTTGTTATGTTCTGTGTCAGTGTTTATGGTGTTCTGTTTTCTGATAGCATGGTTGTTCATGTGCTGTGTGGCGGGTTGATGGGGTTTCTGTGGATTCAGAGTGGGTGGCTTGGTCATGATTCTGGTCATTATCAGATCATGGTGAACAGGAAATGGAATCGGTTTATGCAGATCCTTTCTGGGAATGTTCTTGCTGGTATAAGCATTGGGTGGTGGAGATGGAACCATAATGCTCATCATCTTGCTTGTAATAGTCTTGATTTTGATCCTGATCTTCAGCATTTACCGTTTTTCGTCGTGTCGTCGAAGTTTTTTACCTCGCTTACATCTTGTTTTTATGGTAGGAAGATGAACTTTGATTCCTTTGCTAGGTTTCTGGTTAGTTACCAGCATTGGAGTTATTACCCTGTGATGTGTTTTGCTAGGCTCAATTTGTTTGCTCAATCGTTTTTCCTGTTACTGTCTAATAGAAAAGTTCCTAACAGAAAGATGGAGCTTTTAGGGTTGCTTGCTTTTTGGATTTGGTACCCTTTATTGGTTTCCTTTTTGCCGAATTGGCGTGAAAAGGTTTTGTTTGTGCTTGCTAGTTTTGCTGTCACTGGTATTCAACATGTTCAGTTCACTTTGAATCATTTCTCTGCCAGTGTTTATGTCGGGCCGCCGACCGCACATGATTGGTTTGAGAAGCAAGCTCATGGAACTCTTGATGTGAGTAGTTCGTCTTGGATGGATTGGTTTCATGGTGGTTTGCAGTTTCAGATTGAACACCATCTGTTTCCAAGGCTTCCGAGGCGTAATCTGAGGAAGATTGCGCCGTTGGTTAAGGATCTGTGCAAGAAACATAACCTTCCTTATACTTGTGTGTCTTTCTGGAAGGCTAATGTGCTTACCGTTCAGACGTTGAGGAATGCTGCTTTGCAGGCGCGGGATCTTACTAAACCAGTTCCGAGAAACTTGGTTTGGGAAGCTGTTAATACTCATGGATGA 1359 0.4511 MAETEPLQKPTYIPLQELQKHNKRGDAWIAIDGKIYDVSKWANHHPGGETPLLNLAGQDVTDAFLAFHPPSAYKRLDAFFTGNYLRDYTVSEVSRDYRSLFSELTKLGLFEDKGHGVLILLSLIVVMFCVSVYGVLFSDSMVVHVLCGGLMGFLWIQSGWLGHDSGHYQIMVNRKWNRFMQILSGNVLAGISIGWWRWNHNAHHLACNSLDFDPDLQHLPFFVVSSKFFTSLTSCFYGRKMNFDSFARFLVSYQHWSYYPVMCFARLNLFAQSFFLLLSNRKVPNRKMELLGLLAFWIWYPLLVSFLPNWREKVLFVLASFAVTGIQHVQFTLNHFSASVYVGPPTAHDWFEKQAHGTLDVSSSSWMDWFHGGLQFQIEHHLFPRLPRRNLRKIAPLVKDLCKKHNLPYTCVSFWKANVLTVQTLRNAALQARDLTKPVPRNLVWEAVNTHG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05370 452 PIRSF FA_sphingolip_des 1 440 IPR012171 GO:0016491
Vivi4g05370 452 SMART Cyt_b5_2 13 85 IPR001199 -
Vivi4g05370 452 Pfam Fatty acid desaturase 145 411 IPR005804 GO:0006629
Vivi4g05370 452 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 90 IPR036400 -
Vivi4g05370 452 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 94 IPR001199 -
Vivi4g05370 452 Pfam Cytochrome b5-like Heme/Steroid binding domain 15 84 IPR001199 -
Vivi4g05370 452 CDD Delta6-FADS-like 145 407 - -
Vivi4g05370 452 Gene3D - 2 84 IPR036400 -
Vivi4g05370 452 PANTHER FATTY ACID DESATURASE 2 6 434 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05370 Vivi-Chr4 187188385 187190204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05370 1 452 Lipid Metabolism Gene Families AT3G61580 63.274 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05370 K21737 - ini:109158372 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05370 4 187188385 187190204 Vivi4g05370 4 187188385 187190204 ECH