Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05365 ATGGAGAACATTACAAAGGATGATGTATCCTCAAACAGCATCAATTCAGATCAGCCATACAGAACTTGGTACCACTTTCAGCCCCCAAAAAATTGGATGAATGATCCTAATGGACCATTGTACTACAAAGGAGTTTACCATTTCTTCTACCAATATAACCCTGATGGAGCAACCTTTGGTAAAACAATGATATGGGCTCATTCTGTATCCAAAGATCTCATAAACTGGACTCATCTCAATGATGCTATAACTCCATCTTTTGCTGGTGACATCAACAGTTGCTTCTCAGGCTCAGCCACTATACTTCCAGGTGATATACCTGCTATGTTGTACACTGGAATCGACGAAAAAAGACATCAAGTTCAAAACTTAGCTATGCCAAAAGATCCAACTGACCCTTACTTAAGGGAATGGGAAAAACACCCTCAAAATCCCTTGATGACAGCACCTAGTGAAGTCGAAGAGCGTGAATTCCGAGACCCTTCAACTGCATGGAAAGGAAAAGATGGAAAATGGAGGGTGATAATTGGTGCTCAAAATGGTGATGAAGGAAAAGTTATTCTTGGCAAAAGTGATGATTTTGTTACTTGGACAGTTGATCCTAATCCTTTTCTTGCAACACAAGGTACTGGTGTTATTGAATGTCCAGATTTTTTTCCTGTGTATATCAATAGCGAAAATGGGGTTGATACATCTATGGAAAATTCGAGTGTTAGACATGTCTTGAAGATAAGCTATCAATGGACGCATATCGATTACTATTTAATTGGAAAATATGTATCTGATTCTGATCAGGATAAGTTTATTCCCGATGAAAAATATAGCGGAACATGGAATGACTTGAGGTTTGACTATGGTAAATTTTTTGCTTCAAAGTCATTTTTTGATTATGCTAAGAACAGGAGAATAATATGGGCATGGGTGGAAGAAACTGAGTCTAGACAAGATGATATTGAAAAAGGATGGGCTGGACTACAGGCAATTCCAAGGAAGTTTTGGCTTGATAAAAGTGGGAAGAGATTAATACAGTGGCCAATTGAAGAGGTAGAAAATCTAAGAGACAAACAAATCAGTATTGCAGGAAAGAAACTTGAGGGTGGATCAACTCTTGAAGTCTTAGGCATCACTGCATCACAGGTTGATGTGGAAGTCTTGTTTGAGCTACCTGATCTACACAGTGCTGAGTTACTAGATCCAAGTGAAGTTGATCCCAAAGTACTCTCTAGTGAAGATTATGCATCAAGAAAGGGCGTGATAGGGCCATTTGGTTTGCAAGCTTTAGCATCAAAAGACCTGACAGAGAAGACTACAATATCATTCAGAATATTTAGAGTCGTCGATCGATATATATGCTTAATGTGTAGTGATACGAGCAGGTCTTCATTGAGAGAGGGCCTTGGCAAAACAATATATGCAACTATATTTGACATTGATCCCAATCTCAAAACAATTTCACTTAGAAGCTTGATTGATAGGTCCATTATTGAGAGTTTTGGAGATGGAGGGAAAGCTTGCATAACAAGTAGAGTTTATCCCTTGTTGGCTATAGATAAAGATGCTCATCTTTATGTATTCAATGATGGAAGCCAAAGTGTGGTTATCTCACAACTTAATGCTTGGAGCATGAAGAAGGCTGAATTTGGAGTGGAAAGCCTAATATAG 1662 0.3851 MENITKDDVSSNSINSDQPYRTWYHFQPPKNWMNDPNGPLYYKGVYHFFYQYNPDGATFGKTMIWAHSVSKDLINWTHLNDAITPSFAGDINSCFSGSATILPGDIPAMLYTGIDEKRHQVQNLAMPKDPTDPYLREWEKHPQNPLMTAPSEVEEREFRDPSTAWKGKDGKWRVIIGAQNGDEGKVILGKSDDFVTWTVDPNPFLATQGTGVIECPDFFPVYINSENGVDTSMENSSVRHVLKISYQWTHIDYYLIGKYVSDSDQDKFIPDEKYSGTWNDLRFDYGKFFASKSFFDYAKNRRIIWAWVEETESRQDDIEKGWAGLQAIPRKFWLDKSGKRLIQWPIEEVENLRDKQISIAGKKLEGGSTLEVLGITASQVDVEVLFELPDLHSAELLDPSEVDPKVLSSEDYASRKGVIGPFGLQALASKDLTEKTTISFRIFRVVDRYICLMCSDTSRSSLREGLGKTIYATIFDIDPNLKTISLRSLIDRSIIESFGDGGKACITSRVYPLLAIDKDAHLYVFNDGSQSVVISQLNAWSMKKAEFGVESLI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05365 553 Gene3D Glycosyl hydrolase domain; family 43 29 358 IPR023296 -
Vivi4g05365 553 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 357 542 - -
Vivi4g05365 553 SUPERFAMILY Arabinanase/levansucrase/invertase 16 346 IPR023296 -
Vivi4g05365 553 ProSitePatterns Glycosyl hydrolases family 32 active site. 25 38 IPR018053 GO:0004553|GO:0005975
Vivi4g05365 553 SUPERFAMILY Concanavalin A-like lectins/glucanases 345 544 IPR013320 -
Vivi4g05365 553 CDD GH32_Fruct1-like 31 334 - -
Vivi4g05365 553 SMART glyco_32 25 502 IPR001362 GO:0004553|GO:0005975
Vivi4g05365 553 Gene3D - 359 542 - -
Vivi4g05365 553 Pfam Glycosyl hydrolases family 32 C terminal 348 541 IPR013189 -
Vivi4g05365 553 Pfam Glycosyl hydrolases family 32 N-terminal domain 25 345 IPR013148 -
Vivi4g05365 553 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 14 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05365 Vivi-Chr4 187127186 187130056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05365 7 545 Glycoside Hydrolase AT3G13784 51.825 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05365 - K01193 gmx:100806220 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05365 4 187127186 187130056 Vivi4g05365 4 187127186 187130056 ECH