Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05364 ATGGAGAACATTACAAAGGATGATGTATCCTCAAACAGCATCAATTCAGATCAGCCATACAGAACTTGGTACCACTTTCAGCCCCCAAAAAATTGGATGAATGGACCATTGTACTACAAAGGAGTTTACCATTTCTTCTACCAATATAACCCTGATGGAGCAACCTTTGGTAAAACAATGATATGGGCTCATTCTGTATCCAAAGATCTCATAAACTGGACTCATCTCAATGATGCTATAACTCCATCTTTTGCTGGTGACATCAACAGTTGCTTCTCAGGCTCAGCCACTATACTTCCAGGTGATATACCTGCTATGTTGTACACTGGAATCGACGAAAAAAGACATCAAGTTCAAAACTTAGCTATGCCAAAAGATCCAACTGACCCTTACTTAAGGGAATGGGAAAAACACCCTCAAAATCCCTTGATGACAGCACCTAGTGAAGTCGAAGAGCGTGAATTCCGAGACCCTTCAACTGCATGGAAAGGAAAAGATGGAAAATGGAGGGTGATAATTGGTGCTCAAAATGGTGATGAAGGAAAAGTTATTCTTGGCAAAAGTGATGATTTTGTTACTTGGACAGTTGATCCTAATCCTTTTCTTGCAACACAAGGTACTGGTGTTATTGAATGTCCAGATTTTTTTCCTGTGTATATCAATAGCGAAAATGGGGTTGATACATCTATGGAAAATTCGAGTGTTAGACATGTCTTGAAGATAAGCTATCAATGGACGCATATCGATTACTATTTAATTGGAAAATATGTATCTGATTCTGATCAGGATAAGTTTATTCCCGATGAAAAATATAGCGGAACATGGAATGACTTGAGGTTTGACTATGGTAAATTTTTTGCTTCAAAGTCATTTTTTGATTATGCTAAGAACAGGAGAATAATATGGGCATGGGTGGAAGAAACTGAGTCTAGACAAGATGATATTGAAAAAGGATGGGCTGGACTACAGGCAATTCCAAGGAAGTTTTGGCTTGATAAAAGTGGGAAGAGATTAATACAGTGGCCAATTGAAGAGGTAGAAAATCTAAGAGACAAACAAATCAGTATTGCAGGAAAGAAACTTGAGGGTGGATCAACTCTTGAAGTCTTAGGCATCACTGCATCACAGGTTGATGTGGAAGTCTTGTTTGAGCTACCTGATCTACACAGTGCTGAGTTACTAGATCCAAGTGAAGTTGATCCCAAAGTACTCTCTAGTGAAGATTATGCATCAAGAAAGGGCGTGATAGGGCCATTTGGTTTGCAAGCTTTAGCATCAAAAGACCTGACAGAGAAGACTACAATATCATTCAGAATATTTAGAGTCGTCGATCGATATATATGCTTAATGTGTAGTGATACGAGCAGGTCTTCATTGAGAGAGGGCCTTGGCAAAACAATATATGCAACTATATTTGACATTGATCCCAATCTCAAAACAATTTCACTTAGAAGCTTGATTGATAGGTCCATTATTGAGAGTTTTGGAGATGGAGGGAAAGCTTGCATAACAAGTAGAGTTTATCCCTTGTTGGCTATAGATAAAGATGCTCATCTTTATGTATTCAATGATGGAAGCCAAAGTGTGGTTATCTCACAACTTAATGCTTGGAGCATGAAGAAGGCTGAATTTGGAGTGGAAAGCCTAATATAG 1653 0.3854 MENITKDDVSSNSINSDQPYRTWYHFQPPKNWMNGPLYYKGVYHFFYQYNPDGATFGKTMIWAHSVSKDLINWTHLNDAITPSFAGDINSCFSGSATILPGDIPAMLYTGIDEKRHQVQNLAMPKDPTDPYLREWEKHPQNPLMTAPSEVEEREFRDPSTAWKGKDGKWRVIIGAQNGDEGKVILGKSDDFVTWTVDPNPFLATQGTGVIECPDFFPVYINSENGVDTSMENSSVRHVLKISYQWTHIDYYLIGKYVSDSDQDKFIPDEKYSGTWNDLRFDYGKFFASKSFFDYAKNRRIIWAWVEETESRQDDIEKGWAGLQAIPRKFWLDKSGKRLIQWPIEEVENLRDKQISIAGKKLEGGSTLEVLGITASQVDVEVLFELPDLHSAELLDPSEVDPKVLSSEDYASRKGVIGPFGLQALASKDLTEKTTISFRIFRVVDRYICLMCSDTSRSSLREGLGKTIYATIFDIDPNLKTISLRSLIDRSIIESFGDGGKACITSRVYPLLAIDKDAHLYVFNDGSQSVVISQLNAWSMKKAEFGVESLI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05364 550 Pfam Glycosyl hydrolases family 32 C terminal 345 538 IPR013189 -
Vivi4g05364 550 CDD GH32_Fruct1-like 31 331 - -
Vivi4g05364 550 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 354 539 - -
Vivi4g05364 550 Pfam Glycosyl hydrolases family 32 N-terminal domain 25 342 IPR013148 -
Vivi4g05364 550 SUPERFAMILY Arabinanase/levansucrase/invertase 16 343 IPR023296 -
Vivi4g05364 550 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 14 543 - -
Vivi4g05364 550 Gene3D Glycosyl hydrolase domain; family 43 30 355 IPR023296 -
Vivi4g05364 550 Gene3D - 356 539 - -
Vivi4g05364 550 SUPERFAMILY Concanavalin A-like lectins/glucanases 342 541 IPR013320 -
Vivi4g05364 550 SMART glyco_32 25 499 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05364 Vivi-Chr4 187127186 187130056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05364 7 542 Glycoside Hydrolase AT3G13784 51.642 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05364 - K01193 gmx:100806220 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05364 4 187127186 187130056 Vivi4g05364 4 187127186 187130056 ECH