Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05362 ATGTTTTTGTTGAAGAAAATTGATTGTAGATGTCTTCTTCATTCTGCAGATCCAAATGCTCCTATGTACTACAAAGGTGTTTATCACTTTTTCTACCAACATAACCCATATGCTGCAACATTTGGTGATAAGATTATATGGGCTCATTCAGTATCCTATGATCTCATCAATTGGATTCATCTCAATAATGCTCTTGAACCAAGTGAGCCTTATGACATCAACAGTTGTTGGTCAGGTTCAGCCACTATACTCCCAGGAGAAAAACCTGTTATTCTTTACACTGGAATCGATCACAATAAACATCAAGTTCAAAATTTAGCTATGCCAAAGAACTTATCAGACCCTTTCTTAAGAGAATGGCAAAAACACCCTCAAAATCCTTTGATCACTCCACCCAATGAGGTTGAAAAAGATGAATTCAGAGACCCTACAACTGCTTGGCATGGAAAAGACGGAAAATGGAGAGTAATCATAGGTGCTCAAAAGGGCGATGAAGGAAAAGTTATTCTTTACCAAAGTGAGGATTTTATTAATTGGACAAAGAATCCAAAACCTTTTTTTGCAACAGATAATACTCGAGTTATTGAATGTCCGGATTTTTTCCCCGTATATATCAATAGTACAAATGGGGTTGATACATCTGTGGAAAATTCAAGTGTTAGGCATGTTTTGAAGATAAGCTATCAAAGCAATCAACATGACTATTATTTTCTTGGTAAATATGTATCTGATAAGGAAAACTTTGTTTCCGATGAAAAATTTTCAGGAACTAGTAAAGATTTAAGGTTTGACTATGGTAAATTTTACGCTTCAAAGTCGTTTTTTGACTATGCTAAGAATAGGAGAATATTGTGGGGATGGGTGAATGAGTCTGACACTGCACAAGACGATATTGAGAAAGGATGGGCCGGTTTACAGGCGATTCCGAGGAAAGTTTGGCTTGATGAAAGTGGGAAGAGATTATTGCAGTGGCCAATTGAGGAGGTAGAAAATCTAAGAGACACAAAAATCAGTATTACAGGAAAGAAACTTGAGGGTGGATCAACTCTTGAAGTCTTAGGCATCACTGCGTCACAGGTTGATGTAGAAGTGTTGTTTGAGCTACCTGATCTAGAAAGTGGCGAGTCGTTAGAAGATTCAAGTGAAGTTGATCCTCAACTATTATGTAGCAAACAATATGCATCAAGAAATGGACAAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCACAGAGCAAACTGCAGTGTCTTTCCAAATATATAAAACTCCAAATCGATATTTATGTCTGATGTGCAGTGATCAGAGCAGGTCTTCATTGCGGCAAGATCTTGATAAAACCACATATGGAACAATTTTCGACATAGATCCCAATCTCAAAGCGATTTCACTTAGAAGCTTGATTGACAAGTCCATTATTGAGAGTTTTGGTGATGGAGGAAGAGCTATCATAACAAGTAGAGTTTATCCATTATTGGCTATAAAGAAAGATGCTCATCTTTATGTATTCAACAATGGAAGCCAAAGTGTGGTTATTTCAAAACTTAATGCTTGGAGCATGAAGCAAGCAGAGATAGGCCATGAGGGAAGTATAAGATGTGCTTAA 1614 0.3711 MFLLKKIDCRCLLHSADPNAPMYYKGVYHFFYQHNPYAATFGDKIIWAHSVSYDLINWIHLNNALEPSEPYDINSCWSGSATILPGEKPVILYTGIDHNKHQVQNLAMPKNLSDPFLREWQKHPQNPLITPPNEVEKDEFRDPTTAWHGKDGKWRVIIGAQKGDEGKVILYQSEDFINWTKNPKPFFATDNTRVIECPDFFPVYINSTNGVDTSVENSSVRHVLKISYQSNQHDYYFLGKYVSDKENFVSDEKFSGTSKDLRFDYGKFYASKSFFDYAKNRRILWGWVNESDTAQDDIEKGWAGLQAIPRKVWLDESGKRLLQWPIEEVENLRDTKISITGKKLEGGSTLEVLGITASQVDVEVLFELPDLESGESLEDSSEVDPQLLCSKQYASRNGQIGPFGLLALASKDLTEQTAVSFQIYKTPNRYLCLMCSDQSRSSLRQDLDKTTYGTIFDIDPNLKAISLRSLIDKSIIESFGDGGRAIITSRVYPLLAIKKDAHLYVFNNGSQSVVISKLNAWSMKQAEIGHEGSIRCA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05362 537 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 13 337 - -
Vivi4g05362 537 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 337 523 - -
Vivi4g05362 537 Pfam Glycosyl hydrolases family 32 N-terminal domain 16 325 IPR013148 -
Vivi4g05362 537 Gene3D Glycosyl hydrolase domain; family 43 14 338 IPR023296 -
Vivi4g05362 537 SMART glyco_32 17 483 IPR001362 GO:0004553|GO:0005975
Vivi4g05362 537 SUPERFAMILY Concanavalin A-like lectins/glucanases 325 525 IPR013320 -
Vivi4g05362 537 Gene3D - 339 523 - -
Vivi4g05362 537 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 19 528 - -
Vivi4g05362 537 Pfam Glycosyl hydrolases family 32 C terminal 328 522 IPR013189 -
Vivi4g05362 537 SUPERFAMILY Arabinanase/levansucrase/invertase 16 326 IPR023296 -
Vivi4g05362 537 CDD GH32_Fruct1-like 17 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05362 Vivi-Chr4 187112482 187116208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05362 17 528 Glycoside Hydrolase AT1G55120 56.513 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05362 - K01193 gmx:100806220 839.336