Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05360 ATGCAAGACCTTCGCCGTTACTCAAACGACACCGTTCACCTCGACCTCGGCACCACCACCACCGCCACCACAACAACAACCACCATGATCACCACCACAACCTCCTCCTCTTCCCTATCCATGGACATAGACGAATCCGCCGAAACCAAAATCCACCGTCTCATATCAGAACATCCCGTCATCATCTTCACTCGATCTTCCTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCTCTACGATCGGTGTTAATCCAACCGTCATCGAATTGGATGACAACGAGATCGCTTCTCTCCCTCATGAAGATGATCATCTTGCTTCTGTTCTTCGTAACCGCTCTCCGGCTGTTTTCATCGGTGGTGCCTGTGTAGGCGGACTTGAGTCGCTTGTTGCTCTTCACGTCAGCGGTCATCTCGTTCCCAAGCTTGTTCAAGTCGGTGCTCTCTATGTATAA 453 0.5099 MQDLRRYSNDTVHLDLGTTTTATTTTTTMITTTTSSSSLSMDIDESAETKIHRLISEHPVIIFTRSSCCMCHVMKKLLSTIGVNPTVIELDDNEIASLPHEDDHLASVLRNRSPAVFIGGACVGGLESLVALHVSGHLVPKLVQVGALYV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05360 150 CDD GRX_GRXh_1_2_like 59 141 - -
Vivi4g05360 150 SUPERFAMILY Thioredoxin-like 47 148 IPR036249 -
Vivi4g05360 150 Gene3D Glutaredoxin 39 149 - -
Vivi4g05360 150 PRINTS Glutaredoxin signature 120 133 IPR014025 -
Vivi4g05360 150 PRINTS Glutaredoxin signature 60 78 IPR014025 -
Vivi4g05360 150 PRINTS Glutaredoxin signature 106 119 IPR014025 -
Vivi4g05360 150 ProSiteProfiles Glutaredoxin domain profile. 48 149 - -
Vivi4g05360 150 NCBIfam glutaredoxin-like family 51 149 IPR011905 -
Vivi4g05360 150 PANTHER GLUTAREDOXIN 50 149 IPR011905 -
Vivi4g05360 150 Pfam Glutaredoxin 60 123 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05360 Vivi-Chr4 187102023 187102688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05360 50 150 Miscellaneous Gene Families AT4G15660 41.176 9.81e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05360 - - tpra:123916685 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05360 4 187102023 187102688 Vivi4g05360 4 187102023 187102688 PCT