Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05358 ATGGAGGAAGCATTAGCATACCCCAGAAGCAGAAAGTTCAATAGGGTATGTGTCTTCTGCGGCAGCAACTCCGGCAACCGCCAAGTTTTCAGTGACGCCGCCATTGAATTGGCCGATGAACTGGTTAAGAGGAAGATAGATTTGGTGTATGGTGGAGGAAGTGTTGGACTGATGGGGTTGATTTCTCAGAAAATGTATAATGGTGGCTGCAATGTTCTAGGGGTTATTCCAAAAGCTCTTATGCCTCATGAGATATCTGGCGAAACAGTCGGTGAAGTGAGAATTGTTTCGGATATGCATGAGCGGAAAGCTGCAATGGCTCAAGAAGCTGATGCTTTTATTGCACTTCCTGGAGGATACGGAACTATGGAAGAGCTTTTGGAGATGATAACTTGGGCACAACTTGGAATTCATAAAAAACCAGTTGGCCTACTGAATGTTGATGGCTACTATAACTTTTTGCTTGCTCTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCCCGGTGCTCGGAATATAGTCGTCTCAGCTTCATCCGCCAAAGAGCTTATGATGGAGATGGAGAGCTACTCTCCATCCCATGAGCATGTAGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGGACAAGAAAATGCAGAATGA 660 0.4485 MEEALAYPRSRKFNRVCVFCGSNSGNRQVFSDAAIELADELVKRKIDLVYGGGSVGLMGLISQKMYNGGCNVLGVIPKALMPHEISGETVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNFLLALFDNGVEEGFIKPGARNIVVSASSAKELMMEMESYSPSHEHVAPHESWQMKQLGNYPGQENAE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05358 219 Pfam Possible lysine decarboxylase 58 188 IPR031100 -
Vivi4g05358 219 NCBIfam Rossman fold protein, TIGR00730 family 15 191 IPR005269 GO:0009691|GO:0016787
Vivi4g05358 219 PANTHER LOG FAMILY PROTEIN YJL055W 9 212 - -
Vivi4g05358 219 Gene3D - 13 207 - -
Vivi4g05358 219 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 13 207 - -
Vivi4g05358 219 SUPERFAMILY MCP/YpsA-like 12 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05358 Vivi-Chr4 186959020 186961290 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05358 K22522 - gmx:100785484 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05358 4 186959020 186961290 Vivi4g05358 4 186959020 186961290 PCT