Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05323 ATGGATTTCAGATTGATGGGTTTGGATGCTCCAGTATTGCATGCTCTGCATCAAATGATGGACCTTTCTGACGACAATTCTTCCGACAAGTCATCATTACACAATGCTCCTACAAGATCCTATGTGAGAGACGCCAAGGCGATGGCTGCAACTCCGGCAGACGTGAAGGAATATTCGAATTCATACGTGTTCGTGATCGACATGCCAGGATTGAAATCCGGTGACATAAAGGTTCAGGTTGAAGATGATAACGTGCTTGTGATAAGTGGTGAAAGGAAGAGAGAAGAAGAGAAAGAAGGTGCTAAGTATTTGAGAATGGAGCGAAGGGTTGGAAAATTCATGCGCAAATTTGTTCTTCCTGAGAATGCTAATACTGATGCAGTTTCAGCTGTGTGTCAAGATGGGGTTCTCAGTGTTACGGTTGAGAAATTGCCTCCGCCTCAGCCTAAGAAACCTCGAACTATTGAGGTTAAGATTGCTTGA 483 0.4389 MDFRLMGLDAPVLHALHQMMDLSDDNSSDKSSLHNAPTRSYVRDAKAMAATPADVKEYSNSYVFVIDMPGLKSGDIKVQVEDDNVLVISGERKREEEKEGAKYLRMERRVGKFMRKFVLPENANTDAVSAVCQDGVLSVTVEKLPPPQPKKPRTIEVKIA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05323 160 SUPERFAMILY HSP20-like chaperones 31 152 IPR008978 -
Vivi4g05323 160 Gene3D - 11 159 IPR008978 -
Vivi4g05323 160 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 44 158 IPR002068 -
Vivi4g05323 160 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 158 IPR031107 -
Vivi4g05323 160 Pfam Hsp20/alpha crystallin family 54 158 IPR002068 -
Vivi4g05323 160 FunFam 17.3 kDa class II heat shock protein-like 11 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05323 Vivi-Chr4 186311922 186312759 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05323 K13993 - csav:115717090 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05323 4 186311922 186312759 Vivi4g05323 4 186311922 186312759 ECH