Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05322 ATGGATTTAAGATTGGTAGGTTTGGACGCTCCTGTATTGCATGCTCTGCACCAAATGATGGACCTTTCTGACGACAATTCTTCCGGCAAGTCATCATACAATGCTCCGACACGGTCGTATGTTAGAGATGCGAAGGCGATGGCTGCAACTCCAGCGGACGTGAAGGAATATCCAAATTCATACGTGTTTGTGATCGACATGCCAGGGTTGAAATCTGGTGACATAAAGGTTCAGGTTGAAGACGATAACGTGCTTGTGATAAGTGGTGAGAGGAAGAGGGAAGAAGAGAAAGAAGGTGTTAAGTATTTGAAAATGGAGAGAAGAGTTGGAAAATTCATGCGAAAATTTGTTCTTCCTGAGAATGCTAATACCGATGCTGTTTCTGCTGTATGTCAAGATGGGGTGCTGAGTGTTACTGTTGAGAAATTGCCTCCCCCTCAGCCTAAGAAGCCTAGAACTATTGAGGTTAAGGTTGCTTGA 480 0.4417 MDLRLVGLDAPVLHALHQMMDLSDDNSSGKSSYNAPTRSYVRDAKAMAATPADVKEYPNSYVFVIDMPGLKSGDIKVQVEDDNVLVISGERKREEEKEGVKYLKMERRVGKFMRKFVLPENANTDAVSAVCQDGVLSVTVEKLPPPQPKKPRTIEVKVA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05322 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 157 IPR031107 -
Vivi4g05322 159 FunFam 17.3 kDa class II heat shock protein-like 11 158 - -
Vivi4g05322 159 SUPERFAMILY HSP20-like chaperones 30 151 IPR008978 -
Vivi4g05322 159 Gene3D - 11 158 IPR008978 -
Vivi4g05322 159 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
Vivi4g05322 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 159 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05322 Vivi-Chr4 186307615 186308361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05322 K13993 - jre:108984742 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05322 4 186307615 186308361 Vivi4g05322 4 186307615 186308361 ECH