Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05297 ATGAGTTTATCAAAGAAAGGGTCTCCGACAGACACAAAGCTGAGCTCTCCAAACAAGGCTGCTTTGAATCCAAATGCGGCAGAGTTTATTCCTTTTTCACTCAGATCATTGCCATCTGGAAGTACTAGCTCGGTAGATGCGACGACAAGGCTTACAACTGCTGGTTCTCTTGGAAAAGCAGTTTTAGATAGATCAGAATCATCTGTTTCAAATAATTCGGATGACGAGGCCCACAACTACTGGCGTTGTCAACTTCCAGATGATATCACCCCTGATTTCAAGGTCATCATGGAAGAAGAAGAACCTCAAGGTCTTAACAATCTCTCTTTAGCAGGCTTATCTATACACGACGAAAATGAGTCCTCGATGTTTCCTTCTACTAATGGAAGTAGATATATACTAAATGAGCAACAAGAATTATCTCAACAACATCTTAATGGAAATACCTTTGCCGACAAGTTACGGTTTTCCAATTCAACATACCGGGAGGAACCATCTTCAGCAAGCTTTTTGAATTCATTGGCAAAGCCTTGGGATAGACCGGTTGGGAATAACAACCTGCATAGCAGTGGTCAAGAGGCACTTGCTTATGATGACAATGCTAGGCATGGATTTATAAATGATGTTTTGACTGAGAATGCTATTGTGGACGAGACCGATTTTAACCCTTTGGACTTTTTAGCTTCTCTATTCCCTGGTTTTGCGTCAGAAAGCCTTGCTGAAGTTTACTTTGCCAATGGATGTGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATAGTAATTTCATCCAGAACCCAAGTCCAAAGACTCTGTCATCTCCCAATCTGACTGGAATGGACTTTCCAGCACTTGCTCCAACAAACGGCCAGACTACTACTGCAAAATATGCAGGAGATAATGTTCAACAAAGTGGCAGTCCTTACTTACCGACTGGCAAAGACTTGCTCATGTTCAAATCCGGCTCTTCTTTTCCATCTAGAGGTGCTACTGACTTTGCTTCAGCTGTCAGGAAATTGGCTTCTCAGGATTCTGGAATATGGAAGTATGATAGAAATGGTTCTGGTGATGCTTCCACTGGATCAAGTAGGAGTTTAAATGTTCTTGCTAGTGCCTACAATGGAGGACAGGGGAGAACTAACGTTGGGGATAGGTTTCAAAACCGTGGTTCTGGCCGGCCAGCTCCTGTCTGGCTAGAAACTGGTGACGCTGTTGCAAATATGTATTCTGAATTTCGGGAGGAGGCTCGTGATCATGCACGCTTACGTAATGCATATTTTGAGCAGGCACGACAAGCTTACCTTATTGGCAATAAAGCCCTTGCAAAGGAGCTAAGTGCTAAAGGGCAACTGCATAACATGCATATGAAAGAAGCTCATGGGAAAGCTCAAGACTCTATTTACCGCCAAAGGAATCCGGTTGGTCCAGAGATGCAGGTTAATGGTAGAGGACATGAAAGAATGATAGACTTACACGGACTCCATGTAAGTGAAGCAATTCACGTGTTGAAACACGAACTGAGTGTGCTAAGAAGCACAGCCAGAGCTGCAGAGCAGCGTTTGCAGGTTTATATCTGTGTTGGTACCGGTCATCATACCAGAGGTTCCCGCACTCCTGCAAGACTTCCAATAGCTGTACAGCGTTACCTACTCGAAGAAGAGGGTCTCGATTTCACCGAACCACAGCCAGGCCTGATTCGTGTTGTGATATATTGA 1731 0.4379 MSLSKKGSPTDTKLSSPNKAALNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLGKAVLDRSESSVSNNSDDEAHNYWRCQLPDDITPDFKVIMEEEEPQGLNNLSLAGLSIHDENESSMFPSTNGSRYILNEQQELSQQHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWDRPVGNNNLHSSGQEALAYDDNARHGFINDVLTENAIVDETDFNPLDFLASLFPGFASESLAEVYFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTGMDFPALAPTNGQTTTAKYAGDNVQQSGSPYLPTGKDLLMFKSGSSFPSRGATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRTNVGDRFQNRGSGRPAPVWLETGDAVANMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQDSIYRQRNPVGPEMQVNGRGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDFTEPQPGLIRVVIY 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05297 576 CDD CUE_CID7_like 222 263 IPR041806 -
Vivi4g05297 576 Gene3D - 461 575 IPR036063 -
Vivi4g05297 576 SMART DUF1771_2 413 478 IPR013899 -
Vivi4g05297 576 SMART SMR_2 491 576 IPR002625 -
Vivi4g05297 576 Coils Coil 505 525 - -
Vivi4g05297 576 Pfam Smr domain 494 562 IPR002625 -
Vivi4g05297 576 MobiDBLite consensus disorder prediction 1 22 - -
Vivi4g05297 576 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Vivi4g05297 576 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 576 - -
Vivi4g05297 576 SUPERFAMILY SMR domain-like 492 574 IPR036063 -
Vivi4g05297 576 ProSiteProfiles Smr domain profile. 494 576 IPR002625 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05297 - - mtr:25481982 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05297 4 186003348 186008847 Vivi4g05297 4 186003348 186008847 ECH