Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05292 ATGGCACATAGTTTGAAAAGAAAGTCTCCAGAAAATGGAGACAATTTAGGCTTCAACAGCTTTTCGCTTGATGATTTGAATGAAGATCTTTTTGAAAGGGTACTTTCGTGGCTACCGACTTCGTCGTTCTTTCGCCTTACTTCTGTCTGCAAAAGATGGAAATCAGCTGCTGGTTCTGTGAGTTTCAAGCTTGCTTGCTCACACGTTCCTTCGAGGGATCCTTGGTTTTTCATGGTTGCTCCGAGTCTCAACCAATCGGTTATCTTTGACTCGGCTGAAAACAGTTGGAAAAAACTCAATCATCCGAATCTTCTGCTCGAAGATTCCAACAAAAGTTGCATGCCGGTTGCAGCGTCTAATGGCCTAGTTTGCTACCGCACGTCGTTGGGGAACTTCATTGTGTCCAATCCCGTGACCGGATCTTGTTGCGAACTTCCTCCGTTGAATTTCAACTCAGAAAACCAATCTCTCAATGCTGTTGTTATGAGTGCTGCTTTCAATGACCAAATGTCCTACAAGATTGTGTTGGTCTTTGGGGAATTACCGAATCTTTCGTTTAAAGTCTATAACTCTAGCTCAGCCTGTTGGGAAGATGAGAATGCTCTTGGGAGGAAGGTCGATGATAGTTCGTCGGATTGTGATTCGACTGACGACAATGTAGTGTACTTCCTGAGCAAGGCCGGAAACGTGGTGGCAAGTAGCATGCAGAGAAGTCCAACCAAGCAATATTCATCGGTCATTACTAACAAAGACGGTCAGGAGATAGTCTATTTTCTGAGCACCTCCGGAACCGTTGTAGCCTGCAATTTGACTTGCAAATCTTTCATTGAGTACCCTAGGTTGTTACCAGTTTTCTGCGAGTACTCTATCGACATTGTAGAATGTAATGGTGAGATGCTAGTTGTTTTGTTATCAGAATTCTTGGAAAGCACAAGTCTTCGTGTGTGGAAATTCGACGAGACTAACCGTTGCTGGCAACAGATTGCAGCAATGCCTGCCTCAATGTCTCACGAATGGTACGGAAAGAAGCCGGATATCAACTGTGTTGGTGCCGGTTCTCGTATTTTCATATGCTTGAACTCTCCTGAGCTATGCACTTATGTAACGTGTGATTTGGTGACCAACAAATGGGTTGAATTGCCAAAATGTTGCATAAATGGAGAAGTCATGGAGTTTATGTCTGCTTTTTCGTTCGAGCCGAGGATAGAGGCTTCTGTGTGA 1221 0.4406 MAHSLKRKSPENGDNLGFNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSAAGSVSFKLACSHVPSRDPWFFMVAPSLNQSVIFDSAENSWKKLNHPNLLLEDSNKSCMPVAASNGLVCYRTSLGNFIVSNPVTGSCCELPPLNFNSENQSLNAVVMSAAFNDQMSYKIVLVFGELPNLSFKVYNSSSACWEDENALGRKVDDSSSDCDSTDDNVVYFLSKAGNVVASSMQRSPTKQYSSVITNKDGQEIVYFLSTSGTVVACNLTCKSFIEYPRLLPVFCEYSIDIVECNGEMLVVLLSEFLESTSLRVWKFDETNRCWQQIAAMPASMSHEWYGKKPDINCVGAGSRIFICLNSPELCTYVTCDLVTNKWVELPKCCINGEVMEFMSAFSFEPRIEASV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05292 406 SUPERFAMILY F-box domain 20 79 IPR036047 GO:0005515
Vivi4g05292 406 Gene3D - 17 62 - -
Vivi4g05292 406 SMART fbox_2 26 66 IPR001810 GO:0005515
Vivi4g05292 406 PANTHER BNACNNG10540D PROTEIN 22 405 - -
Vivi4g05292 406 SUPERFAMILY Galactose oxidase, central domain 86 334 IPR011043 -
Vivi4g05292 406 Pfam F-box domain 23 62 IPR001810 GO:0005515
Vivi4g05292 406 CDD F-box_AtFBW1-like 24 62 - -
Vivi4g05292 406 ProSiteProfiles F-box domain profile. 20 55 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05292 - - gmx:100801096 710.294