Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05196 ATGTCAACTCAACAAGATCAAACAACAACAAATAAAACCAAAAACTCATTCATTTCAATCCTAACACAACCAATTGAATGGCTAACAATGCTAACACGTCACCTCAACCCATCTTTCATAGCTGGAATTTTCATAATCTACGGCATAGGTCAAGGCTTCTCCGTTTCATTCTTCAAACTCGTTTCAGATTATTACTGGAAAGACATTCAAAAAATCCAACCTTCCACCGTTCAACTCTACGTTGGTATTTACTTCATTCCATGGATTCTCAAACCCATTTGGGGGATTCTTACTGATGCTTTTCCGTTACTGGGTTACCGTCGCCGGCCGTATTTTATCCTCGCCGGAGTTGTTGGATTGGTGTCTGCTTTGGTTGTTGCGGTGAAAGGAAAGCTTGCTGCTGTTGCGGCGTTGATGTGTTTTCTTGGTGTTTTTGCTAGTCTTGCTATTGCGGGTGTTACTATTGATGCGTGTATTGCAAGGAAAAGTATTGAGGTTCCTAGGTTGGCTCCGGATTTGCAGAGTTTTTGTGGGTTGTGTTCGGGTTCGGGTGCTCTTATTGGGTATCTTGTTAGTGGATTCTTTGTTCATCATCTTGGTCCACAGGGGTCATTTGGTCTTATGGCAGTTTTTCCTGCTTTGACAATTGTGCTGGGTTTTGTTATCTATGAAAAGAAAGCCAATGGGTTGCATAATGAAAAGAAGCAGGGAGCGATGAAGAATGCGGGAATGATAATTAGAAGCATGTACAAAACAATAAAGTATCCTCAAGCATGGAAGCCCTCACTTTACATGTTCCTTTCTCTTTCTCTTAATGTAACTACTCATGAAGGTCATTTTTACTGGTATACTGATTCGAAAGCCGGTCCTGCATTCTCTCAGGAGTTTGTTGGAGTAATCTATGCAATTGGAGCAGTGGCTTCAATAATAGGTGTTCTAATCTACCACAAGTATCTAAAAAACTACACATTCAGAAGCCTAGTATTCTATGCACAACTCCTATATGCAGTATCAGGTGTATTGGACTTGATCTTCGTTCTCCGTTGGAATTTGAAAATTGGAATCCCTGACTACGTTTTTGTTGTCCTCGAAGAAACCGCTGTTAGAATCACAGGCAAAATAAGGTGGATGCCAATGATGGTACTGAGCGCAAAACTATGTCCTCTAGGAATTGAAGGAACATTTTTTGCTCTTTTAATGTGTATTGATAGCATTGGTGCGCTTATATCCAAATGGGGCGGAGGGTTACTTCTACATGTCCTTCATATTACCAGAAGTGATTTTAACAACCTATGGTTGGCTGTTCTTATAAGGGACATTCTTAGATTTGTTACACTTGTCTTGGTTTTTCTTATTCCTAATGTAGGACCTTATGAAGGATTGCTTCCATCCGAAATGGATAAGAGAGATGGTATTGTTGATGAACAGACCTTGGAGCTTGTTCCTATCCATGCCAAAGTTGAAGTTTAG 1470 0.4034 MSTQQDQTTTNKTKNSFISILTQPIEWLTMLTRHLNPSFIAGIFIIYGIGQGFSVSFFKLVSDYYWKDIQKIQPSTVQLYVGIYFIPWILKPIWGILTDAFPLLGYRRRPYFILAGVVGLVSALVVAVKGKLAAVAALMCFLGVFASLAIAGVTIDACIARKSIEVPRLAPDLQSFCGLCSGSGALIGYLVSGFFVHHLGPQGSFGLMAVFPALTIVLGFVIYEKKANGLHNEKKQGAMKNAGMIIRSMYKTIKYPQAWKPSLYMFLSLSLNVTTHEGHFYWYTDSKAGPAFSQEFVGVIYAIGAVASIIGVLIYHKYLKNYTFRSLVFYAQLLYAVSGVLDLIFVLRWNLKIGIPDYVFVVLEETAVRITGKIRWMPMMVLSAKLCPLGIEGTFFALLMCIDSIGALISKWGGGLLLHVLHITRSDFNNLWLAVLIRDILRFVTLVLVFLIPNVGPYEGLLPSEMDKRDGIVDEQTLELVPIHAKVEV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05196 489 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 23 465 IPR039309 -
Vivi4g05196 489 Gene3D MFS general substrate transporter like domains 38 451 IPR036259 -
Vivi4g05196 489 CDD MFS_FBT 42 450 - -
Vivi4g05196 489 Pfam BT1 family 51 230 IPR039309 -
Vivi4g05196 489 Pfam BT1 family 263 454 IPR039309 -
Vivi4g05196 489 NCBIfam folate/biopterin family MFS transporter 27 456 IPR004324 GO:0016020
Vivi4g05196 489 SUPERFAMILY MFS general substrate transporter 43 453 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05196 Vivi-Chr4 183836325 183839065 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05196 - - gmx:100794191 719.924