Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05190 ATGCAGGAGGAAGAGAATCAAGAAGATTCAGTTTCTGAATCTCAGGAACAAAATGAAGAGAAAAAGTCAAAGGGTTATTGGATTTGGAACTGTTTTTACATTCCAATTCATTGGTTCAAAATGCTTTCAAGGGAAATGCATTGGAGTTTTGTGTTAGGAGTTGTTGTTGTTTATGGAATAAGTCAAGGTGTTGGTGGAGCTCTTGCTGGTGTTGGAACAAAGTATTATATGAAAGATGTTCAGAAAGTTCAACCTTCTGAAGCACAGGTTTATGCTGGAATTACCTCTATTCCTTGGATTGTTAAACCCTTATGGGGTCTTCTTACTGATGTTGTGCCTATATTGGGATACCGGAGAAGGCCTTATTTCATTTTTGCTGGTTTATTAGGAGCGACCGCGATGCTTTTGTTGTCATTTCATGAAAACCTACATCTTGTGCTGGCTCTTTTAGCATTAACAGCAGGGAGTGCTGGGGTGGCAATAGCCGACGTGACCATTGATGCTTGTGTTGCACAGAACAGTATCTCTCATCCTTCCCTTGCTGCAGACATGCAAAGTTTATGCGCCTTTAGTTCTTCTGTTGGAGCATTATTAGGATTCTCAGTTAGTGGCATCTTTGTTCACCTTATAGGCCCTATGGGGGTATTTGGTTTGTTGACTATTCCGGCGGGACTTGTAATTTTGGTTGGATTTCTGCTTGACGAGCCTCGTATGCAAAATTTCTCTTACAGACAGGTGAACCAAAATTTTGTGGATGCTAGCAAGGCAATGTGGACGACATTGAAGAGCGAAAATGTATGGAGGCCTTGTTTATACATGTATCTATCCCTTGCGCTGAGTTTGAATATCCTCGAAGGAATGTTTTATTGGTATACAGACTCAAAGGATGGACCGTCTTTCTCTCAGGAGAGTGTAGGTTTCATATTTTCAATCAGTTCAGTGGGTTCCCTTTTAGGCGCAATACTATACCAATACGCGCTAAAGGATTACGCATTCAGAGACTTGCTCTTTTGGACTCAGTTACTCTATGGTCTATCAGGGATGTTTGATCTGATTATTGTCTTGAGATTGAACCTAAAATTCGGTATTCCAGATTACGTCTTTGTTGTTTTCGTCGAAAGCATAGGACAAATGACTATTCGACTAAAATGGATGCCTATGCTTGTACTAAGCTCCAAGCTTTGTCCTTCTGGCATCGAAGGAACATTCTTTGCTCTATTAATGTCAATCGATAATGTTGGACTTCTCTCGTCGTCATGGGCCGGCGGATTTGTACTTCACGTGCTAAATATCACAAGAACAAAATTTGATAATATTTGGTTGGCGATTTTGATTCGGAATATTTTAAGAATCACTCCACTTTGTATGCTGTTTTTGGTGCCTAGAGTTGATCCTAACTCTTTTGTTCTTCTTCCAAAAGAAAGTGTGGATTCAAAGGTGGATATGGATGCTTCAGAAACCAAAAATGTTGAATTGATTTCCCTTGTACACAGTGTTGATGATAATATGTAA 1512 0.3988 MQEEENQEDSVSESQEQNEEKKSKGYWIWNCFYIPIHWFKMLSREMHWSFVLGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVVPILGYRRRPYFIFAGLLGATAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFGLLTIPAGLVILVGFLLDEPRMQNFSYRQVNQNFVDASKAMWTTLKSENVWRPCLYMYLSLALSLNILEGMFYWYTDSKDGPSFSQESVGFIFSISSVGSLLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLIIVLRLNLKFGIPDYVFVVFVESIGQMTIRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSSSWAGGFVLHVLNITRTKFDNIWLAILIRNILRITPLCMLFLVPRVDPNSFVLLPKESVDSKVDMDASETKNVELISLVHSVDDNM 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05190 503 Gene3D MFS general substrate transporter like domains 44 445 IPR036259 -
Vivi4g05190 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 36 481 IPR039309 -
Vivi4g05190 503 CDD MFS_FBT 53 458 - -
Vivi4g05190 503 Pfam BT1 family 62 229 IPR039309 -
Vivi4g05190 503 Pfam BT1 family 272 462 IPR039309 -
Vivi4g05190 503 NCBIfam folate/biopterin family MFS transporter 39 465 IPR004324 GO:0016020
Vivi4g05190 503 Coils Coil 4 24 - -
Vivi4g05190 503 SUPERFAMILY MFS general substrate transporter 51 429 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05190 Vivi-Chr4 183779576 183782666 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05190 - - ccaj:109816000 818.15