Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05137 ATGGCTTCTTCAGTACTCTCTGTAGCAGCTTCACGCTCTGCTTCACTTCCATTGCATGAAACCACCATCAAGGGAAAGGCCAAAATTCGAAGCAACGGTTTGAGATTTAGCCAGTCTTCTGGCCGGATCTCTATGGTTGCTGCGGTTAATGTTTCTCGGTTTGAGGGTATACCGATGGCTCCTCCTGATCCGATTCTTGGTGTTTCCGAAGCATTTAGAGCGGATACGAGCGATGTTAAGCTCAATCTTGGAGTTGGGGCGTATAGAACGGAAGAATTACAGCCGTATGTGCTTAATGTTGTGAAAAAGGCAGAGAATCTTATGCTGGAGAGAGGGGACAACAAAGAGTATCTCCCTATTGAAGGTTTGGCCGCATTTAACAAGGCAACTGCAGAATTGTTACTCGGAGCAGACAACCCAGCAATCAAACAGCAAAGACATAGAAAGAAATCGTTTTTTTGTTCTTTTCTTTTAATATATTTGCTTGCTTTTATAGAACGATATTTCCCTGAGGCCAAAGTTTTGATATCAAATCCTACGTGGGGTAATCACAAGAATATTTTCAACGATGCCAGAGTACCATGGTCTGAGTACCGATACTATGATCCCAAGACAGTTGGATTGGATTTTGAGGGCATGATAGAAGATATCAAGTCAGCTCCCGAAGGAACTTTTGTGTTACTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCAGAACAGTGGGAAAAAATAGCTGATGTAATTCAACAGAAGAACCACTTTCCATTTTTCGATGTTGCTTACCAGGGGTTTGCTAGTGGAAGCCTAGATGAAGATGCAGCATCTGTGAGATTGTTTGTGTCACGTGGCATGGAGGTTTTTGTAGCTCAGTCATACAGTAAAAATCTCGGTCTGTATGCTGAAAGGGTTGGAGCTATCAATGTCATTTCCTCATCACCAGAATCTGCAGTAAGGGTGAAGAGCCAATTGAAAAGGCTCGCTCGACCAATGTACTCCAATCCACCTGTTCACGGGGCTAGAATTGTTGCTAATATTGTTGGGGATCCAACTCTCTTCGGTGAATGGAAGGCAGAGATGGAAATGATGGCTGGAAGGATAAAAACTGTTAGACAGGCGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGATTGGTCGTTCATACTAAAGCAGATAGGCATGTTCTCATTCACAGGCTTGAACAAGAACCAGAGTGACAATATGACAAATAAGTGGCATATATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGGTTGTCGCTGGCCAAAAGTGAATACCTTGCAGAAGCTATTATCGATTCTTATCATAATGTCAGCTGA 1362 0.4273 MASSVLSVAASRSASLPLHETTIKGKAKIRSNGLRFSQSSGRISMVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRHRKKSFFCSFLLIYLLAFIERYFPEAKVLISNPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQQKNHFPFFDVAYQGFASGSLDEDAASVRLFVSRGMEVFVAQSYSKNLGLYAERVGAINVISSSPESAVRVKSQLKRLARPMYSNPPVHGARIVANIVGDPTLFGEWKAEMEMMAGRIKTVRQALYDSISSKDKSGKDWSFILKQIGMFSFTGLNKNQSDNMTNKWHIYMTKDGRISLAGLSLAKSEYLAEAIIDSYHNVS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05137 453 PANTHER ASPARTATE AMINOTRANSFERASE 48 451 IPR000796 GO:0006520|GO:0008483
Vivi4g05137 453 FunFam Aspartate aminotransferase 338 445 - -
Vivi4g05137 453 SUPERFAMILY PLP-dependent transferases 52 447 IPR015424 -
Vivi4g05137 453 Gene3D Aspartate Aminotransferase, domain 1 57 445 IPR015422 GO:0003824
Vivi4g05137 453 FunFam Aspartate aminotransferase 112 352 - -
Vivi4g05137 453 Pfam Aminotransferase class I and II 80 445 IPR004839 GO:0009058|GO:0030170
Vivi4g05137 453 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 295 308 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vivi4g05137 453 Gene3D - 112 352 IPR015421 GO:0003824
Vivi4g05137 453 CDD AAT_like 81 445 - -
Vivi4g05137 453 PRINTS Aspartate aminotransferase signature 257 269 IPR000796 GO:0006520|GO:0008483
Vivi4g05137 453 PRINTS Aspartate aminotransferase signature 394 412 IPR000796 GO:0006520|GO:0008483
Vivi4g05137 453 PRINTS Aspartate aminotransferase signature 325 350 IPR000796 GO:0006520|GO:0008483
Vivi4g05137 453 PRINTS Aspartate aminotransferase signature 226 245 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05137 Vivi-Chr4 182592137 182595737 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05137 K00811 - gmx:547792 745.347