Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05130 ATGGAACCGGAGGTAAGCATCGAAGGATCATCAATGATCCAAGTCGCCGTAATCCCGATCGGAACGGTACCGCCGAACGTCCTCCGAGACTATTACTCTATGCTACTCCCGCTCCACACGATCCCTCTCTCCGCGATCAGTTCCTTCTACACTGAGCACCAGAAATCGCCGTTCGCACATCAGCCTTGGGATTCCGGTACTCTTAGGTTCAAATTCGTTCTCGGCGGTGCTACTCCAAGTCCTTGGGAGGATTTTCAATCTCATCGGAAAACCCTCGCCGTCGTCGGCATTGTTCACTGTCCTTCCTCGCCGGATCTTAACGCTGTGGTTGATCAATTCGTAAATTCTTATAAATCTTACCCTTCCTCACTCGTTGAACGATGCTTCGCCTTTTACCCTAACGATTCTCAGCTTGAGGAGGGAAGTAAGAGAGGTGGAAATTTGAGATTGTTTCCTCCTGCGGATCGTGCAACTTTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCGTTGCTTATGGAGTTTGAGAAGTGGGTTCTTCAAGCGGAATCTTCTGGAACTATTCTCAAGACGCCGTTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGGAGACTTGGGCGTGCCCAAAAGACCATTGGTGATTACTGTTTGCTGGCAGGTTCTCCTGTTGATGCTAATGCTCATTATTCTACTGCATTAGAACTTGGAAGGTTGACTGGGGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGCCTTGGAGGATGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTATAAGAAGTCACAAGATAATACTCAGCGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCGAGGTTCCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTGACAACAGCTGCAGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTCATACTATACATTGAAATAGCTCGTTTGTATGGTAGTCTTGGATACCAGAGAAAAGCCGCCTTCTTTTCCAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCGATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGATCTTCAATCTCTGATCATTCTATTCATAATAAGGGAATTGGATCAGACAAAGCTGATGGTGGGAAAATGCATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGACCCTCTAACTGCATGGAGTGCAGCAGCACGACTACTTAGGTCCTACTATCCTCTAATAACTCCTGCCGGGCAAAATGGCCTCGCTAACGCACTTTCAAATTCGTCCGAGAGGCTACCACCAGGGACTCGATGTGCCGATCCTGCTTTACCTTTTATAAGGGTGCATTCCTTTCCTGTTCACCCAAGACAAATGGACATTGTAAAACGTAATCCTGCTAGAGAAGATTGGTGGGTGGGTTCTGCCCCTTCGGGCCCTTTCATTTACACGCCATTCAGTAAAGGAGATACCAATAATATCAAGAAGCAAGAGCTTGTTTGGATTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGAGTCGATAGCATCTACCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCAGTGAGCATAAGCCTTCTGCCAAATTCTTCAAAAGTGATTACCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAACACCTGTTTAGAGAGGTTGATAATCTGCTTCTTGGGGCTGCACAAGGGCTCGTTCTTTCTGACCCTTTCCGATGCTGTGGTTCTCCAAAGTTGAAGAATGTATCTGTTCCAAGTATTTCTGTAGTACCGCCACTTCCATTGCTGATATCACATGTTGTTGGAGGAGATGGGGCCATCATTTTGTACGAAGGCGAAATTCGTGACGTGTGGATAAGTTTGGCTAATGCAGGCACAGTTCCTATTGAGCAGGCACATATTTCACTGTCAGGGAAAAATCAAGATTCCGTAATTTCATATTCTTCTGAAACATTAAAGTCTCGTCTCCCTCTAAAGCCTGGAGCAGAAGTGACATTCCCTGTGACTTTGCGAGCCTGGCAGGTCGGCGTGGCAGACGCTGATAATACAAGGCATTCCAAAGATGGAAGTTGCCCATCACTATTGATCCACTACGCTGGTCCGCTGAAAACCTCTGAAGATCCAAATGCTGTATCCCCCGGTAGACGCCTTGTTGTTCCTCTGCAGATTTGTGTTTTACAGGGTTTGTCCTTTGTGAAGGCTCAGCTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAACTCTTCCTAAGTTCGATGATGCAAGTAATAGTTCCACTGGAGAACATGTTAACTCGGAATCGAAAATGGACAGATTGGTGAAAATCGATCCTTTCAGAGGTAGCTGGGGACTGCGTTTTCTCGAACTTGAGCTGTCTAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAACAGTAATGAGGACAATCATTTAGCTGATCAGGATGCTACAGAATATGGCTATCCTAAAACAAGAATCGATAGAGATTGCTCAGCAAGGGTTCTTGTGCCTCTGGAGCATTTTAAATTACCTGTTCTTGATGATTCCTTTTTAACAAAGGACACTCAAACAAATGGTATTGGTGGAGGAAGAAATGCATCATTCTCTGAAAAGAGCAGCAAAGCCGAACTCAATGCTTGTATCAGGAATCTTGTATCTAGGATTAAGGTTCATTGGCACTCAGGACGCAATAGCTCTGGTGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAATCATGGATGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTGTTAAAGATGGTTTTGAATCAAATAATCCTGATCCTGTTAAAGAATCTGATTTACCTGAATCCCCTGCTTCCAAAAGTTCTGTGCTTGCACATGAAATGACACCAATGGTAGCCGTGGTCCGTAATAACACCAAGGATATGATCAAAATGAATCTTAACATTACATGCAGAGATGTAGCTGGAGAAAACTGTGTAGATGGTACCAAATCAACTGTTCTGTGGACAGGTGTTTTGAGTGATATTACCATTGAAATTCCTCCACTTCAGCAAATCAACCATTCTTTCTGCTTGCATTTCCTTGTCCCAGGAGAGTATACGCTACTCGCCGCAGCAGTGATCGATGATGCGAATGACATCCTCCGGGCTCGTGCTAGGGCAACTTCAGCTGCTGAGCCTATTTTTTGTCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATGCATGA 3558 0.4441 MEPEVSIEGSSMIQVAVIPIGTVPPNVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGTLRFKFVLGGATPSPWEDFQSHRKTLAVVGIVHCPSSPDLNAVVDQFVNSYKSYPSSLVERCFAFYPNDSQLEEGSKRGGNLRLFPPADRATLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELGRLTGDYFWYAGALEGSVCALLIDRMGQKDSALEDEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSIHNKGIGSDKADGGKMHHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSSERLPPGTRCADPALPFIRVHSFPVHPRQMDIVKRNPAREDWWVGSAPSGPFIYTPFSKGDTNNIKKQELVWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSRLPLKPGAEVTFPVTLRAWQVGVADADNTRHSKDGSCPSLLIHYAGPLKTSEDPNAVSPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSETLPKFDDASNSSTGEHVNSESKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSNEDNHLADQDATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLTKDTQTNGIGGGRNASFSEKSSKAELNACIRNLVSRIKVHWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVKDGFESNNPDPVKESDLPESPASKSSVLAHEMTPMVAVVRNNTKDMIKMNLNITCRDVAGENCVDGTKSTVLWTGVLSDITIEIPPLQQINHSFCLHFLVPGEYTLLAAAVIDDANDILRARARATSAAEPIFCRGPPYHLRVLGNA 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05130 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 749 IPR013935 -
Vivi4g05130 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 270 IPR013935 -
Vivi4g05130 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 190 IPR013935 -
Vivi4g05130 1185 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1178 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05130 K20306 - gmx:100784850 2103.56