Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05120 ATGGATACATTGCCGACGACGTCGACGGCGAAGAGAGGAGCAAGATCGAAGGTCGCTCAGACATCAAAGCCTTCTCTCCTCTTAGCCTTCTGCTCTTGCGTCGCCTGGCTCTACGTCGCCGGCAGGTTATGGCAAGATGCAGAGAACCGGAATTTACTTGCAAGTCTTCTTAAGAAGAACTCAGCTGAGAGACCTAGGGTTCTCACTGTGGAAGATAAGTTAATGGTACTAGGGTGCAGGGATCTGGAAAAGAGGATTGTTGAAACTGAGATGGAATTGACATTGGCCAAGAGCCAAGGGTACCTCAAAGGGCAACGGCAGCAAACCGCGTCTTCTTCTGATCGTAGGCTTCTTGCTGTTATTGGAGTGTATACTGGATTTGGAAGCCATTTGAAAAGGAATGTATTCAGAGGGTCTTGGATGCCTAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTCGTCATACGTTTTGTACTTGGTCGGAGTCCTAATCGAGGTGATAGCTTGGATCGTAATATTGATGATGAAAACCGCTCAACAAAGGATTTCTTGATTCTTGAAAATCACGAGGAAGCTCAAGAAGAATTGCCTAAAAAAGCAAAAATATTCTTTAGTACTGCAGTTCAGAACTGGGATGCTGATTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGTTTAATTAAACTTCTTGAACATCGCCGTGGCCAGGATGGCGCATATATTGGATGCATGAAGTCAGGAGACGTGATAACAGAAGAGGGAAAGCTTTGGTATGAACCTGATTGGTGGAAATTTGGGGATGAAAAGTCGTATTTCCGGCACGCATCTGGTTCTCTTGTTATACTTTCAAAGAATTTGGCACAGTACATTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGACACATCAATAGGATCATGGATGATGGGCATAAAATCAAAATATATAGATGACACTCGCCTTTGCTGCAGTAGTAGTAGTACAACACAAGATAAGCTATGCTCTGTGGCTTGA 1041 0.4323 MDTLPTTSTAKRGARSKVAQTSKPSLLLAFCSCVAWLYVAGRLWQDAENRNLLASLLKKNSAERPRVLTVEDKLMVLGCRDLEKRIVETEMELTLAKSQGYLKGQRQQTASSSDRRLLAVIGVYTGFGSHLKRNVFRGSWMPRGDALKKLEERGVVIRFVLGRSPNRGDSLDRNIDDENRSTKDFLILENHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIKLLEHRRGQDGAYIGCMKSGDVITEEGKLWYEPDWWKFGDEKSYFRHASGSLVILSKNLAQYININSVSLKTYAYDDTSIGSWMMGIKSKYIDDTRLCCSSSSTTQDKLCSVA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05120 346 Coils Coil 79 99 - -
Vivi4g05120 346 Gene3D - 120 331 - -
Vivi4g05120 346 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 88 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi4g05120 346 FunFam Hexosyltransferase 135 330 - -
Vivi4g05120 346 Pfam Domain of unknown function (DUF4094) 22 99 IPR025298 -
Vivi4g05120 346 Pfam Galactosyltransferase 132 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05120 Vivi-Chr4 182370631 182375919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05120 75 346 Glycosyltransferase AT2G25300 78.309 5.50e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05120 K20854 - gmx:100816327 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05120 4 182370631 182375919 Vivi4g05120 4 182370631 182375919 ECH