Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05107 ATGACTTTCTCCGCATCTTCTCTTCGTCCTACCTCTTCTCCGTCCTGCTCACAGTTGCTATGCTCTCTAAGGTACAATAGGAAGCTTCGGAGCCAAATAGGTTTTGTTGTGACTCAAGGAAGAAAAGATCGCTGGTTAAGGAATGGTGTTACTGTTAGATCAGTGTTGAGTGACAATAGACCTAGTTTTAACAGTTATGGTGCGCCGGAATCTGCAAGGCTTCTTGAGAGGTTGTTTGAGCAGACGCACAAACTGGAGAACCGGATGGCTGGAGAACCGTATCTTCGTGATTTTGAGTCGGATCTTTTATCGGCGCTCATGGAATTGAAGGAGAAGGAGGATCATTTACAGGAAGTGGAGAGAACTGTTTTATTGGAGAATGGAAAATTGAAGCATGCTAAAGAGGAATTAGAGCGTCAGGAGAGTGAAATTGAGGCTGCACGCAATAAGTTTGAGAGGCTTGAAGAGGAGATGAAGGAGGCGACGGCTAGTTTGGTTTCTCAAACTGGACAGATAGAGGAATTGAAGATCCGGCTAAGGGATCGTGATAGTGAGATTGGTGGTTTACATGATGCGTTGTCTTTGAAGGAAGAAGAGGTGGAGAAAATGAGAGTTGCTTTGGCTAAGAAGAGTGAAGAAGCTGCTTATGTTGATTCTGAGCTTAGGCATAAGGTTCGGCTTCTGAGTGAAGCAAACAAGGTTGTTAGCAAACAAGAAATCGAGCTTCAAGAACTTCGGCAACTTGTACGACAAAGAGAAGATGAACTGCGTGTTACGGTGGCTGAGAGAGCATCTGAAGGAGAAAAGCTCAAGATCGCGGAGGCCTCTTTAGAAAAGCAAGCGATGGAGTGGTTGTTAACACAGGAGGAACTTAAGAGACTTGAAGAGGAGGCTTCAAGGCATGCGCGTGAGAGTAGTGAAACACTAGAGGATTTTAGAAGGGTGAAAAAGCTTCTCAGTAATGTGAAGTCTGAGTTAGTTTCATCTCAGCAATCGCTCGCGTCTTCTAGGAACAAAATGGAAGTACAGGAAAGGTTGATGGATCAGCAGCTGGCTGAACTTGAAGACCAAAGGATTAGCGTCATGTTGTACATGGAAAATTTAAAACATGCCCAAATAGAAGTGGAGAGTGAAAGAACTAAACTTGAGGTTGCAGAGGCTTTGAACAAAAAACTTGAACTCGATCTGTCTACAGAGAAGGAGCTCATGAACGGGTTACAGGAAGAGCTGAAGAAAGAGCGAGCTTCTTTAGAGCAGGCTGTCCAAGAAATGTCTTTGATTCAACAGGAATTAGATATAAAAAGTGTCGAGTTAAAGAAAACAAGTGCTCTTCTTGATGTTAAAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAGCATTTGAAATCTGAAAAGGCTTCTCTTCAGATTCTTTTAGAGGAGAAAGACATGGAACTTTCCAGTGCTAGGAAGATGCTGGTGGAACTAAACCAGGAAATCTCTGATCTTAAGATGCTTATGAGCAACAAAGAAACGCAGCTTATTGAAGCAACCAACATGTTAAGGGAGAAAGATGAGCATGTGAAGACAATCGAGAATAAGCTGAATAATACAAGCCTGAAGGCTTCCGAAGCTGAAACTGTAGTAGAACGAGTTTTAGATCTCACAAACAAACTGGTTGCTTCCATTAAGAATGAAGACATCATCAATTCATCAAGACCACTAGATGAATTGAGCGGTCACCTAACCATGCAACTTTCCGAGGTGCGTACTAATGAATTGAGTTTGCAACAAAAACAGCTTGAGAATGTGCTCGAGTTGACCAAGGAAGACTTAAAAACGAAGGAGATGGAAATTCTTGCAGTACAGAAGGCTCTGACAATGAAAGATGAGGAGCTTAAAATGACTATTGCAAGATTGGAAGCGAAAGAGGAAGAGTTAAGAGGAGCAAGGGACAAGGTGACAGAAGATGCTAATGATCATAAAAGGCTGCATGCTTTGGCGCAGGCGAGAGTCAACGAGAAAAATATGGATGACTTGGCAATCGAGAAGCTTCAACTTGAGACAGCTCAGCATGAAGTTAAAGCTGCTACTAGTGCTCTGCAGAAACTTGCTGAAATGAGTCAACAACTTTTGAATAAAACCATTCCGAGTGCTGAAGCCGATAGCTATATCAGTGCCATGCTAAATAACAATGATATTAAACTCGATTCAATCACAAATATCAACTGCATCGACTGTTTAGCCGTAGTAAAAGCAGGAGTTGCTCGACTCTCGGCATTGACGGAGCAACTTGTGATGGATGCTGGTCTTATTGCTGCAAGCTAG 2310 0.4264 MTFSASSLRPTSSPSCSQLLCSLRYNRKLRSQIGFVVTQGRKDRWLRNGVTVRSVLSDNRPSFNSYGAPESARLLERLFEQTHKLENRMAGEPYLRDFESDLLSALMELKEKEDHLQEVERTVLLENGKLKHAKEELERQESEIEAARNKFERLEEEMKEATASLVSQTGQIEELKIRLRDRDSEIGGLHDALSLKEEEVEKMRVALAKKSEEAAYVDSELRHKVRLLSEANKVVSKQEIELQELRQLVRQREDELRVTVAERASEGEKLKIAEASLEKQAMEWLLTQEELKRLEEEASRHARESSETLEDFRRVKKLLSNVKSELVSSQQSLASSRNKMEVQERLMDQQLAELEDQRISVMLYMENLKHAQIEVESERTKLEVAEALNKKLELDLSTEKELMNGLQEELKKERASLEQAVQEMSLIQQELDIKSVELKKTSALLDVKESELVDAKLEIQHLKSEKASLQILLEEKDMELSSARKMLVELNQEISDLKMLMSNKETQLIEATNMLREKDEHVKTIENKLNNTSLKASEAETVVERVLDLTNKLVASIKNEDIINSSRPLDELSGHLTMQLSEVRTNELSLQQKQLENVLELTKEDLKTKEMEILAVQKALTMKDEELKMTIARLEAKEEELRGARDKVTEDANDHKRLHALAQARVNEKNMDDLAIEKLQLETAQHEVKAATSALQKLAEMSQQLLNKTIPSAEADSYISAMLNNNDIKLDSITNINCIDCLAVVKAGVARLSALTEQLVMDAGLIAAS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05107 769 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 85 700 - -
Vivi4g05107 769 Coils Coil 277 311 - -
Vivi4g05107 769 Coils Coil 445 507 - -
Vivi4g05107 769 Coils Coil 592 612 - -
Vivi4g05107 769 Coils Coil 681 708 - -
Vivi4g05107 769 Coils Coil 102 171 - -
Vivi4g05107 769 Coils Coil 368 430 - -
Vivi4g05107 769 Coils Coil 622 654 - -
Vivi4g05107 769 Coils Coil 228 262 - -
Vivi4g05107 769 Coils Coil 193 213 - -
Vivi4g05107 769 Coils Coil 333 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05107 - - gmx:100789623 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05107 4 182125424 182129598 Vivi4g05107 4 182125424 182129598 ECH