Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05080 ATGCAATCAAAATTTTCACTAAACAACCAAAACGCAAAAACAATGAGAAGAATCTGGAACCTTCTCTCCCATAACAACCCTAACAAACTCTTCCAATCCGCATTTTCAATCCCAACCAACTTCCGCGTCACTCCGTTTCGTTCTTACTCCGATCCATCACGCATTCCCAAGCAAAATCGTCCAGGACCGCTTGTGCAGTACAAAAATCTCGTTGATCAAGGGAAGTTGCAGCATGATCCTTACCAGGAAGCTGTTGCTACTGAGCTTCAGAATTTGTTAGCTAGGTTGGAGAATTATGAGAGGGAAATGGAAGAGTATCATGTTAATTTATCGAATTGGGAGAAGAGTAGGGAGAACGAGCGGCAAAGGATTCTCATAGAGGAAGTTGAGAAGCAGCAGAATGAGGAGGATTGGTGGAAGCGGTTGAATAATAAAATCACTGAAAGATGGACCGCTGGGAAAAGACCCGAGAATGTGGAGTCAGGGGTAGGAAAATGGGTATCATATCTTAAACGTGAGAAGAAGCTGGATTCACTAGTTGGTCGCCGCCCAAATGCTCCTCCAGCTCCCAAAGGACTTTACATTTATGGCAATGTGGGCAGTGGGAAGACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATAGTTAAGCATCGGAGAAGGTATCACTTTCATGAGGCCATGCTTAGAATTAATGAGCATATGCACAAGATATGGAAGAAACAAATGGAAGAGAAGCCTTTGCAGTCAGGCATTGCTGGTTGGATTATGAATCTTCCCTTTGACACTAAAGCTAAAGAGTGGCTGGCTGCAGAAGAAAAATACAAGCAAGAGGTGCAAATGAAAAACATTCTTCCAGCTGTAGCAGATAAATTTTTTCTGGATCGAGATGGGGACAAAAAGGGAGCTAACATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATAATTGTGGCTACAAGTAATCGAGCACCAAAGGACTTGAATGAGGCTGGTATGGTACGAGAAATCTTCCAAACCCTTGTCTCCAATTTGGAAGAACATTGTGATAAGGTGTTGGTTGGCAGTGAAATTGACTACCGTCGTTTTATAGCACAGAGATCAGTAAACCGGGCGCACTATTTATGGCCTATTGAAAGGGAAACCACCAATGAATTTGAGAAAAAGTGGCTCAATGCAACAGGCCAATCTGGAGGAAAAATAATCTCTACCGCCATCTCAGTGATGTTTGGAAGGACTCTGGAGGTTCCTGAAAGCTGCGAGGGAGTTGCCCGTTTTACATTTGACTATCTATGTGGTCGTCCGTTGGGTGCAGCGGATTATATTGCAGTAGCTGACAACTATCACACCGTTTTCATATCTGATATTCCAGTGATGAGTATGCGCATTCGTGACAAGGCACGGAGATTTATCACTCTTATTGATGAGTTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCCTCTTCAATCGATGAATTATTTCAAGGAACCGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTTGAAACAGAAGCTGAAGGCAGTAAACTTCGCCGTGATGTCTTAGCAGAAGGCAACGTGGGTTCAGGGGGTACTCCTGTTGGAATCACATCCATACTATCTGGTCAGGAAGAGATGTTTACTTTTCAGAGAGCTATCTCACGCCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTCAGTGATTTCCATCCTTATTTTCAGAGGCATCATAAAAAAAGTCAAATAAATTGTGACAACTTACTGTCTGAGTCATCGTCAATTTGA 1866 0.4244 MQSKFSLNNQNAKTMRRIWNLLSHNNPNKLFQSAFSIPTNFRVTPFRSYSDPSRIPKQNRPGPLVQYKNLVDQGKLQHDPYQEAVATELQNLLARLENYEREMEEYHVNLSNWEKSRENERQRILIEEVEKQQNEEDWWKRLNNKITERWTAGKRPENVESGVGKWVSYLKREKKLDSLVGRRPNAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKKQMEEKPLQSGIAGWIMNLPFDTKAKEWLAAEEKYKQEVQMKNILPAVADKFFLDRDGDKKGANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVREIFQTLVSNLEEHCDKVLVGSEIDYRRFIAQRSVNRAHYLWPIERETTNEFEKKWLNATGQSGGKIISTAISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVADNYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGSKLRRDVLAEGNVGSGGTPVGITSILSGQEEMFTFQRAISRLIEMQTPLYLDGVSDFHPYFQRHHKKSQINCDNLLSESSSI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05080 621 Gene3D - 176 383 IPR027417 -
Vivi4g05080 621 FunFam AFG1-like ATPase isoform C 182 383 - -
Vivi4g05080 621 NCBIfam cell division protein ZapE 282 522 IPR005654 GO:0005524|GO:0016887
Vivi4g05080 621 Coils Coil 82 135 - -
Vivi4g05080 621 Pfam AFG1-like ATPase 174 521 IPR005654 GO:0005524|GO:0016887
Vivi4g05080 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 389 IPR027417 -
Vivi4g05080 621 PANTHER ATPASE N2B 12 602 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05080 Vivi-Chr4 181757126 181768952 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05080 - - mtr:11431777 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05080 4 181757126 181768952 Vivi4g05080 4 181757126 181768952 ECH