Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05075 ATGGCCATTGCTGATCGTAACACTATTGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTGGATAGGAAGCATGTAGCTTTTGGCAAACTTGTGCTAGGGTATGATGTTTTGAAGAAAATTGAAGACGTGGGCGATGAAGAAGGACTCCCATCCGTAACTGTCAAAATAGTTAATAGTGGTGAACATAATGAGGATGGTAAGAAGACACACAAGTCAAAAATTGGAAGGAATGGATCTGCTGAAGCCATTAGTCATGAAGTGCGGAGGAAGGGAAAACATAAAAAATCTTCAGGAGACCGAAGGAAAAAGAGAAAACATTACTCATCAGAATCAGATAGCTCCTCAGATTCAGACACAGAATCTTCAGAAAGTGACAGTGACTCTGACTCAGATTTGTCCTCGTCATCTTACACAAGCTCGTCTAGTGATGACAGGCGGAGGAAGAGAAAGAGATCTAGGAAAGATAAACATCGACATGGAAAAAGAAGAGATAAACGCCGAGAAAAGAAGCGAAGGAAACTAGATAAGCGATCAAAACGTAAATCAAAGAGGGAATCAGACAGTCAAACTGATGCAGATAGTGCAAGTAAGAGTAACGATAGCTCCAGTGGCCAAGGTCTTGATACTCAAGGGAGAATTCAAAAGCACAAAGATCATTCTCAGAAAAATGCTGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATCATCTCCTATTAATCTTAAAAAGAGGGAGGGGCTGAGCAATATAGAGGAGGGAGAATTCCCAAAGGAAAATGGAGCGCAGCGTAGCAACGGCATTGGGGCCAACCATAGATCTGACAGATATGAAGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCAAACCTTGAGCAAGAGTATGAGTATTAGTCCCAATCGTGGGAGTAAAATCCCAAGCATTAGTCCAAAAGAAAGGTTGATCAGAAGTAAAAGCCCCCGTGCTCCATCACAGAGGAGTTTAAGCAGGAGTCCTGTTAGAAGCATCAACAGGAGTCTAAACAAAAGCATCAGCAGAAGCCCTGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTGTGAGAACACACATTCATAGAAATGTCAGCAAGAGCCCTGTTAGAAGTCCTGACCGCAGAAGCATCAGCAGGAGTCTAAACAGAAGCATCAGCAGAAGCCCTGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTGTGAGAACACACATTCATAGAAATGTCAGCAAGAGCCCTGTTAGAAGTCCTGACCGCAGAAGTTTTAGCAAGAGCCCTGTGAGATCTGTTTCTCAAAGCCGCAGGAGCAGGAGTTCTGCTAGAGTATCAACACGAAGAACGGTCAGTAGGAGTCCTGTGAGAGTGTCAAGAAAGAGCTTCAGCAGAAGTCCAATTAGATCACCTGCCAGAAGTCTCAGCAGAAGTTCCGGCCGAGCTCCTTTGAGAAGCATTAGCCAAAGTCCTGTTAGATTGGCAGGGAGAGACAATCACCGCAGCTATTCCAGGAGTCGTAGCCCTGTCCGTAGGGCAAGGACACCTCGTGAGAGGAGTCTGTCAAGGAGTGTGTCACCTGATGTTTCACCAAAACGTATCAGGAGAGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTACAGAACCCCCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGGTACCGCTATAATGGAAGGAATGACCGTGACAGATATTCTGGATACAGAAGGTACTCCCCAAGGCGGAATAGGAGCCCACCTCCACGGAGAAGAACTTCACCAAGGTACCGAAGTAGGAGAAGCAGGTCACCATCTGTATCACGCAGCCCACCTCACCGTTCTCGACGGTATAGTCCAAGCCGTAGCCCGGTTCGCCATCGTTCACCTCCTCGTGTGAATAGGCGCATGTCATCATCCCTCAGCAGGAGTCCATCTCGATCGAGGTCATCTGTGGAATCACAATCTCCAAGAAAAGCAAGCAAAGATAACCGATCAAGGTCTTCGTCTAGAAGCTCCGATGGAGGGAAAGGCTTGGTGTCTTATGGAAATGGCTCTCCTGATTCAAGCCAAAAATGA 2178 0.4679 MAIADRNTIGSHFIITLKADHHLDRKHVAFGKLVLGYDVLKKIEDVGDEEGLPSVTVKIVNSGEHNEDGKKTHKSKIGRNGSAEAISHEVRRKGKHKKSSGDRRKKRKHYSSESDSSSDSDTESSESDSDSDSDLSSSSYTSSSSDDRRRKRKRSRKDKHRHGKRRDKRREKKRRKLDKRSKRKSKRESDSQTDADSASKSNDSSSGQGLDTQGRIQKHKDHSQKNAEVQSSSVLEKESSPINLKKREGLSNIEEGEFPKENGAQRSNGIGANHRSDRYEERQPDVMDDNPGKSRSRSMSPKQTLSKSMSISPNRGSKIPSISPKERLIRSKSPRAPSQRSLSRSPVRSINRSLNKSISRSPVRGRKGRSISRSPVRTHIHRNVSKSPVRSPDRRSISRSLNRSISRSPVRGRKGRSISRSPVRTHIHRNVSKSPVRSPDRRSFSKSPVRSVSQSRRSRSSARVSTRRTVSRSPVRVSRKSFSRSPIRSPARSLSRSSGRAPLRSISQSPVRLAGRDNHRSYSRSRSPVRRARTPRERSLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRYRSRSPVRYRSRSPVRYRYNGRNDRDRYSGYRRYSPRRNRSPPPRRRTSPRYRSRRSRSPSVSRSPPHRSRRYSPSRSPVRHRSPPRVNRRMSSSLSRSPSRSRSSVESQSPRKASKDNRSRSSSRSSDGGKGLVSYGNGSPDSSQK 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05075 725 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 62 IPR002130 GO:0000413|GO:0003755
Vivi4g05075 725 MobiDBLite consensus disorder prediction 293 319 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 409 431 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 273 292 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 362 384 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 616 636 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 667 688 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 195 213 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 91 105 - -
Vivi4g05075 725 Gene3D - 1 66 IPR029000 -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 445 505 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 704 725 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 689 703 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 63 78 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 149 182 - -
Vivi4g05075 725 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 64 IPR002130 GO:0000413|GO:0003755
Vivi4g05075 725 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 64 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 595 611 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 548 568 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 240 261 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 59 725 - -
Vivi4g05075 725 SUPERFAMILY Cyclophilin-like 1 66 IPR029000 -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 517 540 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 648 666 - -
Vivi4g05075 725 MobiDBLite consensus disorder prediction 334 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05075 Vivi-Chr4 181693199 181704024 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05075 K09566 - gmx:100785820 475.322