Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05060 ATGGGTAGCGCGAAGAAGAAGGCTCAGATGTTTGTAAAACTTGTGTCTGCGGCCGGAACTGGATTCTTCTATGTAAAGAGGAAACCAAGAACGTTTACAGAGAAGCTTGAGTTTCGTAAGTTTGATCCTCGAGTTAATCGTCATGTTCTTTTTACAGAAGCTAAAATGAAGTGA 174 0.408 MGSAKKKAQMFVKLVSAAGTGFFYVKRKPRTFTEKLEFRKFDPRVNRHVLFTEAKMK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05060 57 FunFam 50S ribosomal protein L33 1 57 - -
Vivi4g05060 57 Pfam Ribosomal protein L33 12 55 IPR001705 GO:0003735|GO:0005840|GO:0006412
Vivi4g05060 57 Gene3D Ribosomal protein L33 3 57 IPR038584 -
Vivi4g05060 57 NCBIfam 50S ribosomal protein L33 4 57 IPR001705 GO:0003735|GO:0005840|GO:0006412
Vivi4g05060 57 PANTHER 54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL 4 57 - -
Vivi4g05060 57 SUPERFAMILY Zn-binding ribosomal proteins 5 55 IPR011332 GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05060 K02913 - gmx:100811038 109.768