Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05050 ATGGCTACTACTTTTTCTGAAGCATATAGAGATCACCCTCTTCACCTTCATCATATTATCCCACTAGACTTTTCTTCATTTAGAACTTTACCTGATTCACATGCATGGCCTCAATCTAATGATGATAATGATCATCATTTAACATCCAATGGATTGTGCATACCCATCATTGATCTCAATGATCCTAATGCAATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTCAATTTAATTGAAAAGGTTCATGAAGAAGCAAAGAGACTCTTTTCTCTTCCTTATGAAGAGAAAATTAAGGCTCTTAGATCAGCCGGCGGCGCCACCGGATACGGTAGAGCTCGAATATCACCGTTCTTCCCTAAGTTTATGTGGCATGAAGGTTTCACAATCATGGGGTCACCTTCTAATGATGTCAAGAAGATCTGGCCTAATGACTACAAATATTTTTGTGACATAATGGAAGACTATCAAAAACAAATGAAGACACTTGCAGAGAAAATAACAAACATAATATTCAACATCTTAGGAGTTTCCAAAGAACAAAACAAATGGGTTGGTTCAAACAACCATTGTGGAGCACTTCAACTAAACTTCTATCCATGTTGTCCAGATCCAAAAAAGGCTATGGGACTGGCTCCACATACAGACACATCACTCTTCACAATCCTCCATCAAAGTCAAACAAGTGGACTTCAGATATTCAAAGAAGGTGTAGGATATGTTACTGTGGACCCTCATCCAAATACATTAGTTGTTAACACTGGTGACATTCTTCATATACTGTCGAATTCAAGGTTTCGACGTTCTCTTCATCGTGCTATTGTGAATGATGTTAAGGAAAGATATTCTGTGGCTTATTTTTATGGACCTCCGGTTGATTATTTGGTTTCTCCTTTGGTTGTTGATGGTTCTTTGCCACAGTTTCGTTCTTTGACTGTTAAGGATTATATTGGGATTAAGGCCAAGAATTTAGGAGGGGCTTTGTCTTTGATTAGTTACATTACTTGA 1041 0.3842 MATTFSEAYRDHPLHLHHIIPLDFSSFRTLPDSHAWPQSNDDNDHHLTSNGLCIPIIDLNDPNAMEQIGLACEKWGAFQLKNHGIPFNLIEKVHEEAKRLFSLPYEEKIKALRSAGGATGYGRARISPFFPKFMWHEGFTIMGSPSNDVKKIWPNDYKYFCDIMEDYQKQMKTLAEKITNIIFNILGVSKEQNKWVGSNNHCGALQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTSGLQIFKEGVGYVTVDPHPNTLVVNTGDILHILSNSRFRRSLHRAIVNDVKERYSVAYFYGPPVDYLVSPLVVDGSLPQFRSLTVKDYIGIKAKNLGGALSLISYIT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05050 346 Pfam 2OG-Fe(II) oxygenase superfamily 205 301 IPR044861 -
Vivi4g05050 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Vivi4g05050 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 154 IPR026992 -
Vivi4g05050 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 54 327 - -
Vivi4g05050 346 SUPERFAMILY Clavaminate synthase-like 17 335 - -
Vivi4g05050 346 Gene3D - 17 329 IPR027443 -
Vivi4g05050 346 FunFam Gibberellin 3-beta-dioxygenase 1 18 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05050 Vivi-Chr4 181338568 181339844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05050 44 344 Glycosyltransferase AT5G59530 26.444 8.36e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05050 K04124 - gmx:100808546 525.783