Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05047 ATGGCTTCTTTAAACATATTCACTCCGGTTCCACTCACCGCCGGCATCCAAAATCCAACAAACTCTTTCCCCCGTCGGCGACCAAACTCAGTTTCCTTCGTTTCAAATTCGCCGGAATCTCCTCCCGAAATAGAACTCGAATTCATTGCGCCTAAACCGGACGGCGAGGGTTCGTTCCCGGTGGATAAAGCAAAAGCAGTTAGCGGCGAGAAGTTGATGAGGAGCATCATGTTGGATAACAAGATTGAACTTTATGCCACCTATGGGAAGTTGATGAACTGTGGGGGAGGTGGTAGCTGTGGAACTTGCATTGTCGAGATAATTGAAGGAAAGGATCTTTTAAATGAAAGGACAAATACGGAACTGAAATATCTTAAGAAGAAACCTGAATCTTGGAGACTGGCTTGTCAAACTATTGTTGGGAACAAGGAAAACTCTGGCAAGGTGGTTGTTCAAAGGATTCCTCAATGGAAGAAGTAA 480 0.4479 MASLNIFTPVPLTAGIQNPTNSFPRRRPNSVSFVSNSPESPPEIELEFIAPKPDGEGSFPVDKAKAVSGEKLMRSIMLDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELKYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05047 159 PANTHER FERREDOXIN/ADRENODOXIN 33 156 IPR001055 GO:0051537|GO:0140647
Vivi4g05047 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 140 IPR001041 GO:0051536
Vivi4g05047 159 MobiDBLite consensus disorder prediction 17 39 - -
Vivi4g05047 159 SUPERFAMILY 2Fe-2S ferredoxin-like 69 142 IPR036010 GO:0051536
Vivi4g05047 159 Gene3D - 59 158 IPR012675 -
Vivi4g05047 159 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05047 Vivi-Chr4 181235757 181238450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05047 - - gmx:100807125 261.151