Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05040 ATGAAGCCACGACAGTCTTCGTTGAATCCATATGCAGCAGCATACGTTCCAGTCTCTAAAAGGGATGCTAATGCTAATGCTAGTGCTAGATTTTACGCGACGGAAGAGGAGAATAACAGTTCGCAAGACTACGACGGGACTGCGTGGTTTCAGCCTCCTCAGTATGCTGGGAATAATGTCCAGCTTCTCAAGAATAATCCGCAAAGGCTCTCTCCGGGGAAGAGTCAGCCTGGTTCTAGTTCCTACTTTTCGTCACAGCAGAGTGTAGCGCCGCTGGCAGATAAGCATTTTATGGATGAAGAGGTTGATATAGATTTGGAATATCTTAGGATGACGTTTCCGGGGATATCGGATGAGTCGCTTGTAGATGTTTACAATGTAAACGGTGGGGACCTGGATGCTGCTGTTGATATGCTCAGCCAACTTGAGTTTGATGATGCTGTTGACTCTTCTGGAAATCTTCCAGACTCACTGGATATTGGTGATGTTTCAGAGCCTGCACTACCAGCTAATTCTCCTTCATCAAAACAGAAGAATGCGACAGCTGAAGCCAGTACTTCATTTGGTCACTTGTGA 576 0.4601 MKPRQSSLNPYAAAYVPVSKRDANANASARFYATEEENNSSQDYDGTAWFQPPQYAGNNVQLLKNNPQRLSPGKSQPGSSSYFSSQQSVAPLADKHFMDEEVDIDLEYLRMTFPGISDESLVDVYNVNGGDLDAAVDMLSQLEFDDAVDSSGNLPDSLDIGDVSEPALPANSPSSKQKNATAEASTSFGHL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05040 191 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 187 IPR038981 -
Vivi4g05040 191 MobiDBLite consensus disorder prediction 148 191 - -
Vivi4g05040 191 MobiDBLite consensus disorder prediction 29 85 - -
Vivi4g05040 191 MobiDBLite consensus disorder prediction 31 85 - -
Vivi4g05040 191 Gene3D - 93 151 - -
Vivi4g05040 191 MobiDBLite consensus disorder prediction 168 191 - -
Vivi4g05040 191 CDD CUE_CID7_like 103 145 IPR041806 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05040 Vivi-Chr4 181178673 181181059 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05040 - - gmx:100781938 188.734