Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05003 ATGGGTTCCCTATTCCAGCTTTGCGTCGGCTTCAACTTTAACGCTTCCAATCATCTTCACGCTCAAGCTACTACTACCAATTGCAAGTTCTCCCCTCAATCTGTGAGAGCACTTCCTATACGGATATTATCCGTGGGAAAAAAACGATCACAAGGACTGCAACTCATGGTCGACGAGTATGTCGAAAAGATTAAATATTATTGCAGTGTTGAGGATGTTCAAATTCGGCCAAATCCTAGAAATGCACGTGATCCCAGGGCGCAAGTTGATGACGAAGACATGGCAGTGATGAATATTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACATGGGCAAGATGTACGGTCTGAGCAAATGGCAGAGTTGATGGCTGATGCAGGAAATACTAGATTACATGGTTATACAGGTAATTACACTAAATAA 429 0.4242 MGSLFQLCVGFNFNASNHLHAQATTTNCKFSPQSVRALPIRILSVGKKRSQGLQLMVDEYVEKIKYYCSVEDVQIRPNPRNARDPRAQVDDEDMAVMNIIRSDDWVVMLDEHGQDVRSEQMAELMADAGNTRLHGYTGNYTK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05003 142 SUPERFAMILY alpha/beta knot 39 131 IPR029028 -
Vivi4g05003 142 Gene3D - 37 137 IPR029026 -
Vivi4g05003 142 Pfam Predicted SPOUT methyltransferase 40 130 IPR003742 GO:0006364|GO:0008168
Vivi4g05003 142 PANTHER METHYLTRANSFERASE 19 132 IPR003742 GO:0006364|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05003 Vivi-Chr4 180377582 180383364 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05003 K00783 - gmx:100796609 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05003 4 180377582 180383364 Vivi4g05003 4 180377582 180383364 ECH