Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04945 ATGAAACCTTCAACAAATGACACAACCATTCACATTGATCATTCATCTTCCAAAAGAGTGTCTTTCTCAGACGAAAATCACACAAATGTTGAACAACAACAACAGCAGCACCAACAGCATCAACACAATGTTCCTTTGTTACTTCAACCATCCTATTCAAGATCAAAATTCATTATCATTGATGAACTAAGAAACTTTCGTATATGTCTTAAATGGTGTGCTCTTGATCACTCATCTTGTGCTGGAAAACTCATCTCTTATGGAACCTTCATCCTCCTCACTTTCGTTCTTCCTCTCTTCACAACACTCTTTGTTCAAGTCTCTGATGCTTCCCCTCAAGATGACCCTATCTCCTTGAACAAGCTTGTTCAAATACCCGAATCCGCACTTGCCATAATTTCCTTCTTCGCTCTTTCCCGTTTCTTCCTAAGGTACGGGCTAAGACAACTTCTATTTCTAGATGCATTACAAGACGATACTACATATGTTCGCCGAGGCTACGCGCGCGAGCTGCAAAAAGCATTCAGATACTTGGGATACATAATCTTACCCTCTTTTTTTCTAGAGCTTGCTCATAAAATCATCTTCTTCTCAGCAGTTAAGATTTCGGCACCGAATATTAGTGCTGGATTTCCTCTACACTCAATAGTATTTGTGTTGATGTTAATTTCTTGGTTATATAGAACAGGAATATACTTATTGGTATGTGTGATTTTTAGACTTACTTGTCAACTCCAAATATTGAGATTTGAAGGTGTTCATAAGTTATTTGAAGGGTTTGGTTCTGAAGCAGGTGTTATATTTAAAGAACATGTGAGAATTAGAAGACAGTTATGGGTTATAAGTCATAGGTATAGGTTTTTCATAATTTGTTGTGTTGTTACAATGAGTGTTAGTCAGTTAGGTGCTTTATTGCTAGTTTTGGCTTCGAAGTCGGAGAAGACTTTCTTTAACTCGGGCGATCTTGTGATATGTTCGGCGGTGCAATTGAGTGGCTTCTTCTTGTGCATCCTAGGAGCAACAAAAATCACACATAGAGCTCAAGGAATAGTCTCAATTGCAACAAGATGGCACATGTTGGTGACTAATGCTTTTGCTGAATCAGAACAATGCAAAGATCAAATGTCTGATGCAGTAGCTAGTGATAGTAGTGATTCTGATTCCTCGGATATTCACATATCAATAATTCCACAAAGACTTTCTTCCTTCCATACAAGACAGTCGTTAGTGATGTATCTACAACACAACCATGGAGGGATAACATTGTATGGATTTTCACTTGATCGAGGGTTGATTCATACTCTCTTTGCCTTCGAATTCTCTATAGTGCTTTGGATTCTAAGTAAGGTGGTTGTCTTGTCTTAG 1365 0.3817 MKPSTNDTTIHIDHSSSKRVSFSDENHTNVEQQQQQHQQHQHNVPLLLQPSYSRSKFIIIDELRNFRICLKWCALDHSSCAGKLISYGTFILLTFVLPLFTTLFVQVSDASPQDDPISLNKLVQIPESALAIISFFALSRFFLRYGLRQLLFLDALQDDTTYVRRGYARELQKAFRYLGYIILPSFFLELAHKIIFFSAVKISAPNISAGFPLHSIVFVLMLISWLYRTGIYLLVCVIFRLTCQLQILRFEGVHKLFEGFGSEAGVIFKEHVRIRRQLWVISHRYRFFIICCVVTMSVSQLGALLLVLASKSEKTFFNSGDLVICSAVQLSGFFLCILGATKITHRAQGIVSIATRWHMLVTNAFAESEQCKDQMSDAVASDSSDSDSSDIHISIIPQRLSSFHTRQSLVMYLQHNHGGITLYGFSLDRGLIHTLFAFEFSIVLWILSKVVVLS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04945 454 Pfam Protein of unknown function (DUF3537) 61 438 IPR021924 -
Vivi4g04945 454 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 29 453 IPR021924 -
Vivi4g04945 454 MobiDBLite consensus disorder prediction 16 40 - -
Vivi4g04945 454 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04945 Vivi-Chr4 179585083 179587474 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04945 - - gmx:100783743 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04945 4 179585083 179587474 Vivi4g04945 4 179585083 179587474 ECH