Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04941 ATGGAGTACACAAACCTTGATGCCACAAATGAGAAACTCATACAAAATGACATCTCTTCATCTTCTTCTTCTTCTTCTCAACCCAGAAAAGGTGGTTTCAGAACCATGCCCTTTATCATAGTGAATGAGTGTTTTGAAAGAGTGGCAAGTTTTGGAATAATGCCAAACATGATATTGTACTTGAGAGATGATTATAACATGCCTATTCCTAAAGCTACTAATTTTCTTTATACTTGGTCTGCTATGTCTAATATCTTGTCCATTTTTGGTGCTTTTCTCTCTGATTCTTACTTGGGTCGCTTCAATGTCATCTTCATTGGTTCCCTCTCAAGCCTTCTTGGTTTAACCATTTTATGGTTTACTGCAATGGTCCCGGCGCTGAAACCCTCCGGTGAATCATCGTCGCTAATCCATGTCTTGGATTCTGCTACATCATCTCAACTAGCAGTTTTGTTCGTTTCCTTAGGATTGATTTCGATCGGAGCTGGTTGTGTTAGACCTTGTTCTATAGCCTTTGGAGCAGATCAATTAGCTATTAAGGAAAATTCCGATGATGGATGGAAAATTGGGCTTGGAGTACCTGCTTTTCTAATGTTGATATCGGCTATCAGTTTCGTTGTTGGTTCACCGTTTTATGTCAAAGGGAGGCCGAGTGAGAGCTTACTCACTAATTTTATAAGAGTAGTTGTTGTGGCCATAAAGTACAGAAAGCATAGTCTTCCTGATCATGGCTTTGATCAGTACTGTCAAGGCCGTGATTCGGATCTGATGGTTCCTACCGATAGCCTGAGGTTTTTGAACAAAGCTTGCGTAATAAGAAATCATGAGACGGACTTAAACTCAGATGGATCAGTTTCAAATCCGTGGAACCTATGCACAATAGGACAGGTGGAGTCACTGAAATCATTGCTTAGAGTTATTCCTATGTGGTCGACGGGAATCTTTATGATGGCAACTCAAACTTCATTTTCCACTCTTCAAGCCAAAACAATGAACCGAAGGTTATTCGGTAATTTCAATTTTCCTGCAGGATCGTTTAATCTTATCATGGTATTCACCTTATCAATAGTCATTCCTTCGTACGACCGTATAGCAGTACCTCTACTAGCGAAATACACAGGCCGGCCTAGAGGGTTCAGTTGTAAAGTCCGCATTGGGATAGGAATGTTGTTTATATGTGCAGCTAAAGCAATAGCAGCTATTGTCGAAACCGTGAGACGAAAGGCAGCCATTGAACAAGGGTTTGAGGACCAACCAAATGCGGTAATCAACATGTCGGCTTTATGGCTTGTTCCGGAGTTCGTTTTGCTTGGGTTGGGCGAGGCTTTCATGCCAGTTGCATTTGTTGAGTTTTTCTACACTTATTTCTCCAAGAGTATGTCGAGTTTCGCAATGGCTATTTTCACATTGGAACTAGCTGGCGGTGATGTAGTTTCGAGTATGCTTGTGAGCATTGTGGACAAGGTCAGTATCATCGGAGGAAACGAGAGCTGGTTATCGACTAACATCAACAAGGGCCATCTGAACTACCATTACGCGCTACACGCTTTCTTAGGTATGATTAACTACCTCTATTTTCTTGTTATTTGTCGGGCTTATTATAGACCCGAACACGGAGAAAAACTTGAAGCTTCAAAAGGAAAGGAGGATGATAAATTTGATTACAGGGAGTTGCATACATCATAA 1686 0.4122 MEYTNLDATNEKLIQNDISSSSSSSSQPRKGGFRTMPFIIVNECFERVASFGIMPNMILYLRDDYNMPIPKATNFLYTWSAMSNILSIFGAFLSDSYLGRFNVIFIGSLSSLLGLTILWFTAMVPALKPSGESSSLIHVLDSATSSQLAVLFVSLGLISIGAGCVRPCSIAFGADQLAIKENSDDGWKIGLGVPAFLMLISAISFVVGSPFYVKGRPSESLLTNFIRVVVVAIKYRKHSLPDHGFDQYCQGRDSDLMVPTDSLRFLNKACVIRNHETDLNSDGSVSNPWNLCTIGQVESLKSLLRVIPMWSTGIFMMATQTSFSTLQAKTMNRRLFGNFNFPAGSFNLIMVFTLSIVIPSYDRIAVPLLAKYTGRPRGFSCKVRIGIGMLFICAAKAIAAIVETVRRKAAIEQGFEDQPNAVINMSALWLVPEFVLLGLGEAFMPVAFVEFFYTYFSKSMSSFAMAIFTLELAGGDVVSSMLVSIVDKVSIIGGNESWLSTNINKGHLNYHYALHAFLGMINYLYFLVICRAYYRPEHGEKLEASKGKEDDKFDYRELHTS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04941 561 Gene3D MFS general substrate transporter like domains 5 181 IPR036259 -
Vivi4g04941 561 Gene3D MFS general substrate transporter like domains 182 540 IPR036259 -
Vivi4g04941 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 186 533 - -
Vivi4g04941 561 Pfam POT family 183 499 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vivi4g04941 561 Pfam POT family 101 180 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vivi4g04941 561 SUPERFAMILY MFS general substrate transporter 27 531 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04941 Vivi-Chr4 179562362 179564895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04941 7 536 Organic Solute Cotransporters AT1G52190 46.410 1.33e-172 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04941 K26551 - gmx:100789054 731.095