Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04889 ATGGAGTTTCCTCATTTGTCCATATTTATAGCACTCAGTCTTACACTTGTTGTATCAACCAATGCTGTATTACCTCCTCAATTGTACTGGAAGTCCAAACTTCCCACTACTCAAATGCCAAAAGCCATCACAGATCTCCTCAACCCAACTGATTGGACAGAAGAGAAAGGCACATCGGTAGCGGTAGGAAAAGGTGGTGTTAATGTTGATACAGCAAAACCAAAACCAGGAGGAACCGCGGTTAACGTAGGAAAAGGTGGAGTCCATGTTAATACAGGAAAAGGAAAACCTTCAGGTGGAACAGCGGTTAACGTTGGAAAAGGCGGTGTCAATGTTAACACAGGAAAAGGAAGAGGAAAACCAGTTCATGTTTCAGTTGGAAAACGTTCTCCGTTTTTATACAATTATGCTGCAACTGCAACACAGTTAAATGATAAACCTAATGTAGCACTTTTCTTCTTAGAAAAGAATTTGCATTATGGAACAAAGTTGAACTTGCAATTCACGAAAACAACCTCAAACAACGAAGCAAAGTTCTTAACCAAAGAAGTATCTGATTCTATCCCCTTTTCATCAAACGAAGTGGAAAGCATCCTTAACAAATTCTCCATCAAAAAAGGCTCGGAGGAAGCTGAAACTGTGAAGAACACGATAAGCGAGTGCGAAGAAAACAGCATCAGAGGAGAAGAAAAGCTTTGTGTAAAATCATTGGAATCTATGGTTGATTTCACTACTTCGAAACTTGGAAACAATGTTGAAGCTGTTTCAACAGAAGTGAAAAAAGAAAGTAGTGAGTTACAGCAATATGTAATAGCGAAAGGAGTGAAGAAACTGGGAGGGAAGAACACAGCTGTTGTGTGTCACAAAGAGAATTATCCTTATGCAGTTTTTTACTGTCATAAAACAGACACAACTAAAGTTTACTCAGTGCCATTGGAAGGTGTTGATGGAAATAGAGTTAATGCTATTGCTGTTTGTCACACAGATACATCACAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTTAAAGTTCAACCTGGAACTGTTCCTGTTTGTCACTTTCTTCCACAGGATCATGTTGTTTGGGTTTCCAAGTGA 1101 0.3906 MEFPHLSIFIALSLTLVVSTNAVLPPQLYWKSKLPTTQMPKAITDLLNPTDWTEEKGTSVAVGKGGVNVDTAKPKPGGTAVNVGKGGVHVNTGKGKPSGGTAVNVGKGGVNVNTGKGRGKPVHVSVGKRSPFLYNYAATATQLNDKPNVALFFLEKNLHYGTKLNLQFTKTTSNNEAKFLTKEVSDSIPFSSNEVESILNKFSIKKGSEEAETVKNTISECEENSIRGEEKLCVKSLESMVDFTTSKLGNNVEAVSTEVKKESSELQQYVIAKGVKKLGGKNTAVVCHKENYPYAVFYCHKTDTTKVYSVPLEGVDGNRVNAIAVCHTDTSQWNPKHLAFQVLKVQPGTVPVCHFLPQDHVVWVSK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04889 366 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 21 365 IPR044816 -
Vivi4g04889 366 Pfam BURP domain 151 364 IPR004873 -
Vivi4g04889 366 ProSiteProfiles BURP domain profile. 152 366 IPR004873 -
Vivi4g04889 366 SMART BURP_2 150 366 IPR004873 -
Vivi4g04889 366 Coils Coil 204 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04889 Vivi-Chr4 178671820 178673587 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04889 - - gmx:100170724 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04889 4 178671820 178673587 Vivi4g04889 4 178671820 178673587 ECH