Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04767 ATGGCGTTTCTCCGGTCCCTTCCACAACCACTAAATCCATTATCATCCACTGATTTCCTTCATCATCACCGGCTTTCCTATCCTCAACAACAACAACATCACATCAATTTCCCCGTCACAAAAACCACCGCTCTCAAAGATTCTGATCTTTCTAGAAGCTTACATGATTCTAAATCTCAAGTCTCTGATGCTGTTCCTCTTTTATCTTCCTCCCAGGTCTATGAAAAGATGAAAACATTTAGAGAAAACATAAAGGGAAAGCAGCAATATCTTGCCATGTATTCTGGTATTTTTGGTGGGATAACAACTGATCCAGCAACTATGGTTATTCCTATGGATGACCATATGGTCCATAGGGGCCACGGTGTCTTTGATACTGCAGCAATAATGGACGGGTGTCTGTACGAGCTAGATCAACATCTGGATCGCTTTTTAAATTCAGCATCAAGGTCGAAAATAGATCTCCCGTTTGATCGTGAAAGTATTCGAAGAATTCTTATACAAACTGTGAGCGCTTCTAAATGTCGAAATGGATCACTAAGATACTGGCTATCAGCAGGACCGGGTGACTTTAACCTCTCTCCCTCTGGCTGCCACCAATCGGTACTTTATGCAATTGTAATACAGGACATGTCACCAGCAGCGGACTCAGTTAAGTCCAAGGGAGTTAAAGTCATCACTTCATCTATTCCGATAAAACATCGCATGTTTGCCATCACTAAGAGTGTGAATTACCTTCCGAATGTGCTTTCAAAGATGGAGGCGGAAGAAGCTGATGCTTTTGCAGGCATTTGGCTTGACGATGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTAGCTTTTGTAACTAAAGAGAAGGAACTTATAATGCCACACTTTGACAAAATTCTAAGTGGGTGTACAGCTAAGAGAGTTTTAATCCTTGCTGCGCGTTTGATCGAGCAGGGTAAGCTTCGGGGGATAAGAAAGAAAAACGTGTCTGTCGAAGAAGGGAAGAAAGCAGATGAAATGATGCTTCTTGGTAGCGGAGTTCTAGTTTGCCCTGTAGTGCAGTGGGATGAGCAGATTATTGGAGATGGCAAAGAAGGCGATATAACACACGATCTCTCAAATCTAATTGTTGAAGACATGAAATCAGCATCTCCCTCTGTTAGAACACCTGTTATATATTGA 1176 0.4201 MAFLRSLPQPLNPLSSTDFLHHHRLSYPQQQQHHINFPVTKTTALKDSDLSRSLHDSKSQVSDAVPLLSSSQVYEKMKTFRENIKGKQQYLAMYSGIFGGITTDPATMVIPMDDHMVHRGHGVFDTAAIMDGCLYELDQHLDRFLNSASRSKIDLPFDRESIRRILIQTVSASKCRNGSLRYWLSAGPGDFNLSPSGCHQSVLYAIVIQDMSPAADSVKSKGVKVITSSIPIKHRMFAITKSVNYLPNVLSKMEAEEADAFAGIWLDDEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLILAARLIEQGKLRGIRKKNVSVEEGKKADEMMLLGSGVLVCPVVQWDEQIIGDGKEGDITHDLSNLIVEDMKSASPSVRTPVIY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04767 391 Pfam Amino-transferase class IV 122 352 IPR001544 GO:0003824
Vivi4g04767 391 FunFam D-amino-acid transaminase, chloroplastic 69 208 - -
Vivi4g04767 391 CDD PLPDE_IV 114 374 - -
Vivi4g04767 391 PANTHER AMINO-ACID AMINOTRANSFERASE 61 382 - -
Vivi4g04767 391 FunFam D-alanine aminotransferase 214 381 - -
Vivi4g04767 391 Gene3D - 214 386 IPR043132 -
Vivi4g04767 391 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 98 381 IPR036038 GO:0003824
Vivi4g04767 391 Gene3D - 68 209 IPR043131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04767 Vivi-Chr4 176906337 176908598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04767 K18482 - gmx:100794026 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04767 4 176906337 176908598 Vivi4g04767 4 176906337 176908598 ECH