Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04658 ATGAAGAGTTGTAAGAGAGAAATGGAGAAGAAATCAGAGATAAGTTGTGTCATTGAAGAGCTTTCTATGGTGGTAATTGTTAAACCTTCTGAAGAGAATCATGAAGCTGCTCATATCCCTACCAAGCCTTTCCTCTCTATATGTTATTCTGTTCTACAAGTTCTTGATAAAATTGGACCAACAATGGCTGTTTTGAGAGAAGATGTGCACCAAAATATCAAGAGATTGGAATTGATGCATGAATCAAATCCGACAACAATATCAAATTTGGTTGAGATATTAAAATTAGAAGCAACAGAAGGCAATGCAAGGAAGGGGTCTAGCTGCAGTAAGGCCTTTGTTTGGCTCACAAGGGCCTTGGATTTCACCTCATCATTACTAGAAATACTATCAAAAGATCCTGAAAAGAAAATGAACAAAGCAGTTGAAGAATCTTACGATGTAACATTAAAACCCTGGCATGGATGGATTGCATCAACTGCTTCTAGGGTTGCTCTAAGATTAGTTCCAGAAAGTAAAACATTCATTAATCTCCTTAAGACTGAAGATGAAGAAACTGACATGCTTATACAGAAAATGCAGATATTAGTTTCTCTACTTGTGCCTTTTCTTGAGGATATCCACTGTATTTTAAGATTATACAACTTGGACAAGCTGAAATCAACCTGA 669 0.3632 MKSCKREMEKKSEISCVIEELSMVVIVKPSEENHEAAHIPTKPFLSICYSVLQVLDKIGPTMAVLREDVHQNIKRLELMHESNPTTISNLVEILKLEATEGNARKGSSCSKAFVWLTRALDFTSSLLEILSKDPEKKMNKAVEESYDVTLKPWHGWIASTASRVALRLVPESKTFINLLKTEDEETDMLIQKMQILVSLLVPFLEDIHCILRLYNLDKLKST 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04658 222 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 10 210 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vivi4g04658 222 FunFam Glycolipid transfer protein 2 3 217 - -
Vivi4g04658 222 Pfam Glycolipid transfer protein (GLTP) 39 179 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vivi4g04658 222 SUPERFAMILY Glycolipid transfer protein, GLTP 34 219 IPR036497 -
Vivi4g04658 222 Gene3D Glycolipid transfer protein 5 218 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04658 Vivi-Chr4 174793819 174798113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04658 13 207 Acyl Lipid Metabolism Gene Families AT2G34690 20.408 5.78e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04658 - - gmx:100803131 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04658 4 174793819 174798113 Vivi4g04658 4 174793819 174798113 ECH