Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04653 ATGAGAGGTCCCACTCCGAGTGCGGTTGAGCCGCGTCACCGACTGTCAACATTCAGTGAAGATACTAACAAAAGAAGGTCTCAAAGAAATAAGGATTTTAAAGATGTTGAGAAAGCATCACATGTTTCCTTCCAAGATAGGGCGATAAATTGCAAGCCGAATTGGAAATTTGTTCTGGTTGTTATTATATTGGGAACCTTGCTTACAATTTTCCATCCTCCAGCTGTTTATAATACTGATCACATCTCAAACTCTATATCACGGTCAACAATTGTAAACAACAGGAATGGAGAGTTCGGTGGAACTGATCCCCGTTATGTATCATTTCTAAATATCGACTGGAACCAAATTACTAATGTTCTTGAAAATTTGAAGGATAAGGAGACATATCAGGGCGTTGGCTTACTAAACTTCAATGACAGTGAGATTGACCACTGGAAGCAGCTGGTACCAGAAAGCGAGCATGTAGTCCTTCACCTGAACTATGCTTCAAATAACATCACTTGGGAAGACTTGTATCCTGAATGGATAGATGAAGAAGAAGAATACGAGTTTCCTACTTGTCCATCACTACCTAGGATTCAGGTACCAGGAAAACCACGGCTTGATCTTATTGCTGTTAAGCTTCCTTGCGACAAGTCAGGGCGCTGGTCAAGAGATGTAGCTCGTTTGCATCTGCAGATTGAAGCAGCAAGACTTGCTGCTACTTCCAAAGGGCTTCGTCCAGTTCGTGTGCTTTTTGTGACTGATTGTTTCCCAACTCCAAATCTATTCACTTGCAAGGATATTATAAAGCGTGAAGGGAATGTCTGGCTTTATGAACCCAACTTGCATAAACTCAGAGAGAAGCTGCAGTTACCAATTGGTTCATGTGAACTATCAGTTCCATTCAAGGCTAAAGAAAATTTTCACTCCGAAAGGGCACACCGAGAAGCTTATGCAACAATCCTGCACTCTGCACATATATATGTTTGTGGAGCTATTACTGCTGCTCAAAGTATTCGAATGTCTGGTTCAGCACGTGATCTCGTGATTCTTGTTGACGAAACAATCACTGATTATCATAGGGGTGGTTTGGAACAAGCTGGATGGAAGATTCATACTATTAAAAGAATCAGGAATCCGAAAGCAGAACCAGAGGCATATAATGAGTGGAACTACAGCAAATTTCGTCTCTGGCAGTTAACTGATTACGACAAAATCATTTTCATTGATGCCGACCTTCTTATACTCAGAAATATTGATTTCCTTTTTGAGATGCCTGAAATATCAGCCATAGGAAACAATGCTACACTGTTCAACTCAGGTGTAATGGTGGTTGAACCGTCGAACTGTACATTTCAACTACTAATGGATCACATCAATGAGATTGTGTCCTACAACGGCGGGGACCAGGGCTATCTTAATGAAATTTTCACATGGTGGCATCGTATTCCGAAACACATGAACTTCTTGAAGCACGTCTGGGAAGGCGATGAAGAAGAGAAAAAGGCGACAAAAACTCGTCTCTTTGGAGCTGATCCACCAACCCTCTATGTCATCCACTATCTAGGTAATAAACCATGGCTTTGTTTCCGTGACTACGACTGCAACTGGAACGTGGACATTCTGCAGGAGTTTGCGAGCAATGTAGCTCATGCAAGGTGGTGGAAGCTTCATGACGCAATGCCAGAAAACTTGCAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCGGCATTGGAGTGGGATCGTAGACAAGCCGAGAAAGGTAACTACAGCAATGGTCACTGGAAAATCAAGATTAAAGACCCGCGATTGAAAACGTGCTTCGAGGATTTCTGCTTCTGGGAGAGTATGTTATGGCATTGGGGTGAAAAGAATTGGACAGATAACTCTACTGTTAACATTTCGCCACCTGCTGTCAAAACCAAATCTCTATCTTCTTTATGA 1932 0.4224 MRGPTPSAVEPRHRLSTFSEDTNKRRSQRNKDFKDVEKASHVSFQDRAINCKPNWKFVLVVIILGTLLTIFHPPAVYNTDHISNSISRSTIVNNRNGEFGGTDPRYVSFLNIDWNQITNVLENLKDKETYQGVGLLNFNDSEIDHWKQLVPESEHVVLHLNYASNNITWEDLYPEWIDEEEEYEFPTCPSLPRIQVPGKPRLDLIAVKLPCDKSGRWSRDVARLHLQIEAARLAATSKGLRPVRVLFVTDCFPTPNLFTCKDIIKREGNVWLYEPNLHKLREKLQLPIGSCELSVPFKAKENFHSERAHREAYATILHSAHIYVCGAITAAQSIRMSGSARDLVILVDETITDYHRGGLEQAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHVWEGDEEEKKATKTRLFGADPPTLYVIHYLGNKPWLCFRDYDCNWNVDILQEFASNVAHARWWKLHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYSNGHWKIKIKDPRLKTCFEDFCFWESMLWHWGEKNWTDNSTVNISPPAVKTKSLSSL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04653 643 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 308 559 IPR029044 -
Vivi4g04653 643 CDD GT8_Glycogenin 311 556 - -
Vivi4g04653 643 Pfam Glycosyl transferase family 8 317 523 IPR002495 GO:0016757
Vivi4g04653 643 MobiDBLite consensus disorder prediction 14 34 - -
Vivi4g04653 643 MobiDBLite consensus disorder prediction 1 34 - -
Vivi4g04653 643 SUPERFAMILY Nucleotide-diphospho-sugar transferases 311 561 IPR029044 -
Vivi4g04653 643 PANTHER GLYCOGENIN SUBFAMILY MEMBER 219 603 - -
Vivi4g04653 643 FunFam Hexosyltransferase 308 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04653 Vivi-Chr4 174701595 174706631 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04653 4 619 Glycosyltransferase AT1G77130 68.650 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04653 K20890 - gmx:100787339 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04653 4 174701595 174706631 Vivi4g04653 4 174701595 174706631 ECH