Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04646 ATGGTGACAGGAGAAGATTTATACAACGTGATGTGTGCAATGGTACCTCTATATTTCGCAATGCTAGTTGCTTACGGTTCAGTGAAGTGTTGCAAAATGTTCACACCAGAGCAGTGTTCTGGGATAAACCGATTTGTGGCGGTTTTCGCTGTTCCGGTTTTGTCTTTTCATTTTATTTCTCTCAATAATCCTTACCAAATGGACACTAAATTTATCTTAGCGGATACAGTTTCTAAGGTTTTTGTTCTCTTTTTTATTTCTGTTTGGGCTATTTTCTTTGTTAATGGCTCTTTGGATTGGGTTATCACTTTGTTCTCAGTTGCCACCTTGCCTAATACACTTGTTATGGGGATTCCTCTACTTCAAGCTATGTATGGTGATTTTACAGAAAGTCTCATGGTGCAACTCGTTGTTCTTCAATGCATCATATGGTATACTGTGCTACTATTTCTACTGGAATACAGAGCAGCAAAACTCTTAATCAAAACCGAGTTCCCGGGAAACAAAGCAACCTCCATAACAAAATTCGAACTCGACGGCGACGTAATTTCCCTCTACGGCCAAGACGCGCCGCTGCAAACCCTATCAGAAACCGACGAAAACGGCCGCATTAAAGTCCGTATCCGCCGATCCACTTCCTCCGCACCAGCCGAATCAACCTCATCAATAACCACCGGCATAACTCCAACGCGACTCTCCAATCTCTCCAACGCCGACATTTTCTCCATCAACACGCCGTTGAATTTTCTCGACAATCCGAGCGCGAGTCCTCGCTTCTCCGGTTATGCTTCGACCGATGCTTATTCGCTGCAGCCGACTCCGCGTGCATCGAATGTTAATGAGGCGGAGATATGTGGTACGCCGGGGGTGGGGAGGTCGCCGGTGGGTGGTGGGAGGGGGTTGAGAGGGAACTCGCCTGAGAAATGGCAGGGGGAAGAGAGACAAGGATGCAAGGACTTTACTATGTCAGATAAGGAAATTAGCTTCAGAGATAGCCTCAAAATTCCAATGGCAGGGGAAGCTGTGGACCCAAAAGAACAAATTTCCAATAACCAGAAAATGCCATATGCCTTTGTAATGTTAAGGCTTATACTTATAGTTGTTGGAAGAAAACTTTCTCGAAATCCTAATACATATTCTAGCCTATTAGGACTTCTCTGGTCTCTAATCTCCTTCAAATGGAATGTAGAAATGCCGAGTTTGATCAAATCATCCATCAAAATCATATCTGATGCAAGTCTTGGAATGGCAATGTTTAGCTTAGGGCTTTTCATGGCTCTTCAGCCTCGTATAATTGCGTGTGGTACAAAAAAAGCAGCCATGGGAATGGCCATTCGATTCCTATTTGGACCTCTTGTAATGTCATTATCTTCCATTGCCATTGGATTGAGAGGAAAAAAACTGCACACTGCCATTGTACAGGCTGCTCTTCCACAAGGGATAGTGCCATTTGTATTTGCAAGGGAATATGGGCTGCATCCTGATATTTTGAGCACAGGGGTAATCTTTGGCATGCTAATTTCCTTGCCAATAACTCTCATTTACTACATTTTTCTTGGCTTGTGA 1566 0.4381 MVTGEDLYNVMCAMVPLYFAMLVAYGSVKCCKMFTPEQCSGINRFVAVFAVPVLSFHFISLNNPYQMDTKFILADTVSKVFVLFFISVWAIFFVNGSLDWVITLFSVATLPNTLVMGIPLLQAMYGDFTESLMVQLVVLQCIIWYTVLLFLLEYRAAKLLIKTEFPGNKATSITKFELDGDVISLYGQDAPLQTLSETDENGRIKVRIRRSTSSAPAESTSSITTGITPTRLSNLSNADIFSINTPLNFLDNPSASPRFSGYASTDAYSLQPTPRASNVNEAEICGTPGVGRSPVGGGRGLRGNSPEKWQGEERQGCKDFTMSDKEISFRDSLKIPMAGEAVDPKEQISNNQKMPYAFVMLRLILIVVGRKLSRNPNTYSSLLGLLWSLISFKWNVEMPSLIKSSIKIISDASLGMAMFSLGLFMALQPRIIACGTKKAAMGMAIRFLFGPLVMSLSSIAIGLRGKKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLISLPITLIYYIFLGL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04646 521 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 520 - -
Vivi4g04646 521 NCBIfam auxin efflux carrier 1 521 IPR014024 -
Vivi4g04646 521 MobiDBLite consensus disorder prediction 281 315 - -
Vivi4g04646 521 Pfam Membrane transport protein 10 516 IPR004776 GO:0016020|GO:0055085
Vivi4g04646 521 MobiDBLite consensus disorder prediction 212 228 - -
Vivi4g04646 521 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04646 Vivi-Chr4 174576366 174585555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04646 1 499 Organic Solute Cotransporters AT1G77110 62.568 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04646 K13947 - gmx:100800139 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04646 4 174576366 174585555 Vivi4g04646 4 174576366 174585555 ECH