Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04638 ATGGATATTGCTCATTTCATATTTGGTATATTTGGAAACGCTTTTGGCCTTTTCCTCTTCTTGGCTCCAATAATCACTTTCAAGAGGATTATTGTGAAGAAATCAACAGAGAAATTCTCTGGTGTTCCATACATTATGACACTTCTCAACTGTCTTCTTTCTTCTTGGTATGGTTTACCATTTGTGTCACCACACAACATACTAGTAACAATAATCAATGGAACAGGAGCAGTGATTGAAATCATATACGTTTTCATCTTCATCCTATATGCACCAAAAAAGGAGAAGCTGAAAATAAGTGGCTTATTTGCTTTTGTGATAACAGTATTTGCAGCTGTTGTTTTCATTTCACTCTTTGCTTTGCATGGTAATTCAAGGAAAGTGTTTTGTGGTTTTGCTGCTGCAATATTCTCAATCATTATGTATGGTTCACCTCTCTCTATTATGAGATTGGTGGTGAAAACAAAAAGTGTGGAGTTCATGCCATTCTTCCTTTCACTATTTGTGTTCCTTTGTGGTACCTCTTGGTTCATCTATGGTGTTCTAGGCCGTGATCCATTTATCGCCGTACCAAATGGTGTAGGGTCATTCTTGGGGACATTGCAACTAATATTGTATTTGATATATCGTGGGAATAAAGGGAATAATGCAAAGACAACAACAGAAGAAGAATCAATGGAAATGGGCACCGCAAAGCCAATGGGAGAAGAGGAACTCAAAGGGGACACGTCTAAGGACACGTGTTAG 747 0.3802 MDIAHFIFGIFGNAFGLFLFLAPIITFKRIIVKKSTEKFSGVPYIMTLLNCLLSSWYGLPFVSPHNILVTIINGTGAVIEIIYVFIFILYAPKKEKLKISGLFAFVITVFAAVVFISLFALHGNSRKVFCGFAAAIFSIIMYGSPLSIMRLVVKTKSVEFMPFFLSLFVFLCGTSWFIYGVLGRDPFIAVPNGVGSFLGTLQLILYLIYRGNKGNNAKTTTEEESMEMGTAKPMGEEELKGDTSKDTC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04638 248 Gene3D - 127 223 - -
Vivi4g04638 248 Gene3D - 5 96 - -
Vivi4g04638 248 MobiDBLite consensus disorder prediction 218 248 - -
Vivi4g04638 248 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Vivi4g04638 248 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016020
Vivi4g04638 248 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Vivi4g04638 248 MobiDBLite consensus disorder prediction 229 248 - -
Vivi4g04638 248 PANTHER RAG1-ACTIVATING PROTEIN 1 15 220 IPR047664 -
Vivi4g04638 248 FunFam Bidirectional sugar transporter SWEET 7 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04638 Vivi-Chr4 174398482 174400843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04638 1 190 Miscellaneous Gene Families AT1G21460 76.842 2.45e-104 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04638 K15382 - gmx:100800304 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04638 4 174398482 174400843 Vivi4g04638 4 174398482 174400843 ECH