Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04578 ATGACTGATAAGAAGAGATGGTTATGGAAGCGGAAATCTTCCGAGAAGAGTTCGGGTGAAGCTGAGAGTTCGGGATCTGTTTCCTCTCATTCTGAGAGGTATTCTGATGAACAGGAAGTATCTAAGGAATCTTCAAATGGAAGCAATCATTCACCTGATGTCACCTCAAAAGCTGTGACCTGTGATGATGATGTTGATGATTGTTCAGTTATCAATGAACAACTGCCTGATGAAGTTGCATCAACACATCTACCTTCTACATGCGTCGTAAATGGTGGTTCATTAGAGATGAATGAAAATGGAGAAAATAAAAATATATCAAATGGAAAAGAAGATGATGTAAGTGACGGGTCGAGGGATATGTCTGAGAAGCTATCTGCTGCTCTTGTTAATGTCAATGCCAAAGAAGATTTGGTTAAGCAGCATGCGAAAGTCGCTGAAGAAGCCATAGCAGGCTGGGAAAAAGCCGAAAATGAAGTAGCGGTTTTAAAGAAGCAACTCGAGACAGTCACTCTGAGGAATTCGTCTCTTGAAGATAGAGTCACTCATCTTGATGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAAACAAGAGAAGAGCACGAAGCGAATATTCAAGATGCCGTAGCCGAGAAGACTCACGAATTGGAATCGGACAAAATTAAACTCGAGGGCAAGCTTGTTGAGCTCCAGAAAAAATTAGACGCATCAAATGCCAAATCTTCTGTTGATCGTGATATGCGTCAAAAAGTTGAGTGGTTCGAGAAAGAGAATATGGCTCTCAGGCATGATATCCTAGTTCAATCGGAAGAGCTAAAAATCAGAACAATCGAGAGAGATTTGAGCACTCAATCCGCTGAGACAGCTAGTAAGCAACATTTAGAAAGCATCAAGAAAGTAGCTAAGCTTGAGGCTGAATGTCGGAGACTGAAGAGCATGGCTTCTAAAGCACTGTCGATTACTGATCATAAATCGATTGTGTCATCCTCATTTTGTGTTGAATCTCTAACGGATAGTCAATCAGATAGTGTGGAACGACTTACGGCAGCGGATTGTGATATCTACAAGATGAGTGGTTCGGAACTAAACAGGTGTGAGCCAAGTGTTTCCGACTCATGGGCGTCTGCATTAATAGCTGAGCTTGATCAGTTCAAGAATGAAAAATGCTGCCGACCAGCTCCATCCGGTTCTGTTAACATAGATCTGATGGACGACTTTCTTGAAATGGAACGACTTGTTGCATTGCCCGACACTAAGAACAAAAGCTTTGTCGAGGAGTCCGTTGTCGTTGACAAAGAAACCGCTCTCAGAGCCGAGTTTGACGACATGAATCAGCAAATGGATGAACTAAAAGGGAAGTTAGAAAAGGTGGAAGGAGATAAAGCTGAACTAGAGATCGCTTTGATGGAAAGTAAAGAGTTTATCGAGGAGTCTCAACTTCAGTTGAGGGAAGCTGAACAGAAACTAGAGGAGCTTCAAATAGAGCTAGAAAACTCCTACAAATCAAATCAAAAGGTTGACAATCTCCTAATAAGCATGGAGGCAGACACTCGAACACTATTGTCCAAAGTCAACTCATTAGAAACCGAGGTTGATAATGAAAAGGCTCTGTCGCACGAAATTGCGATGAAGTGTAAGGATCTGGAAGAAGAGTTAGAAAGAAAGTCTTCAATGCTCAGCTTATTAGAAGTTGAGGTTGAAAAGGAGAGGAACGCGTCGCGTGCATTGGTAAAAGAGTTAGAAAGCAAATCTTCAATGCTTGGCTTATTAGAAGTTGAGGTTGAAAAGGAGAGAAACACCTCGCATGAAATTGCAATAAAATATGAGGGTCTCGAGGAAGCGCTAGAAGAAAAATGTGCAAAGGTTGAGTTGTTAGAAGCAGAGATTGTCAAGGAAAGAGCCGTGTCGGATGAAGTTGCAATCAAGTGTAAGAAATTGGTGGAAGAGCTTGAAATCAAATCCGCAAAGGTTGAGTTATTAGAAGCAGAGGTTGAAAAGGAGAAAGCCATGTCTGAAGAATTTGCATTGAAGTGTAATGAATTGGAGGATGAGATACTCAGGCCAACATCTAGCTTGTATGGAGAAAAGAAAATCAAGCAGGAGGACCTAGCACTCGCGGCCGGAAAGCTCGCCGAGTGCCAGAAAACAATAGCATCTTTAGGGAATCAGCTAAAATCTCTGGCCACACTTGAGGATTTCCTTATCGATACTGCTGGAATTCCTTCAAGTCCATCCCTTGTTGCTCATGCTGGTGGCGAGACATGGAAGATGCATTCAAATGACACGTTTTCACCTAAAAGAGATTCCATTTCTTCTAGGTTGCCCGACGCTAGCTCCGGTCTATCCCTAAACAAAAACGAGGAAAGCTCGCCACTTACATATTCTCCTTCAACTTCATCGGGAGCCTTGCCAAATCACGCTAGTTCTGAGAGGAGCCGAAATGGTTTCGCAAAATTTTTCTCGCGAACCAAGAGTGGTATTAGGCTAGAAATCTAG 2499 0.4246 MTDKKRWLWKRKSSEKSSGEAESSGSVSSHSERYSDEQEVSKESSNGSNHSPDVTSKAVTCDDDVDDCSVINEQLPDEVASTHLPSTCVVNGGSLEMNENGENKNISNGKEDDVSDGSRDMSEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLETVTLRNSSLEDRVTHLDGALKECVRQLRQTREEHEANIQDAVAEKTHELESDKIKLEGKLVELQKKLDASNAKSSVDRDMRQKVEWFEKENMALRHDILVQSEELKIRTIERDLSTQSAETASKQHLESIKKVAKLEAECRRLKSMASKALSITDHKSIVSSSFCVESLTDSQSDSVERLTAADCDIYKMSGSELNRCEPSVSDSWASALIAELDQFKNEKCCRPAPSGSVNIDLMDDFLEMERLVALPDTKNKSFVEESVVVDKETALRAEFDDMNQQMDELKGKLEKVEGDKAELEIALMESKEFIEESQLQLREAEQKLEELQIELENSYKSNQKVDNLLISMEADTRTLLSKVNSLETEVDNEKALSHEIAMKCKDLEEELERKSSMLSLLEVEVEKERNASRALVKELESKSSMLGLLEVEVEKERNTSHEIAIKYEGLEEALEEKCAKVELLEAEIVKERAVSDEVAIKCKKLVEELEIKSAKVELLEAEVEKEKAMSEEFALKCNELEDEILRPTSSLYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTAGIPSSPSLVAHAGGETWKMHSNDTFSPKRDSISSRLPDASSGLSLNKNEESSPLTYSPSTSSGALPNHASSERSRNGFAKFFSRTKSGIRLEI 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04578 832 Coils Coil 434 510 - -
Vivi4g04578 832 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 3 559 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 765 811 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 105 119 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 759 811 - -
Vivi4g04578 832 Coils Coil 546 584 - -
Vivi4g04578 832 Coils Coil 214 241 - -
Vivi4g04578 832 Coils Coil 609 629 - -
Vivi4g04578 832 Pfam Filament-like plant protein, long coiled-coil 135 241 IPR008587 -
Vivi4g04578 832 Pfam Filament-like plant protein, long coiled-coil 367 425 IPR008587 -
Vivi4g04578 832 Pfam Filament-like plant protein, long coiled-coil 247 319 IPR008587 -
Vivi4g04578 832 Pfam Filament-like plant protein, long coiled-coil 650 730 IPR008587 -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 41 56 - -
Vivi4g04578 832 Coils Coil 192 212 - -
Vivi4g04578 832 Coils Coil 644 685 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 92 119 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 1 18 - -
Vivi4g04578 832 MobiDBLite consensus disorder prediction 1 60 - -
Vivi4g04578 832 Coils Coil 153 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04578 Vivi-Chr4 173598486 173602323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04578 - - mtr:25482469 1201.04