Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04544 ATGTCTTTAACAGGGAAAGTGGAGAGTGAGACAGAGATTGCAGCAACTGCTGCTAAGTTCTATCATGTTTTTAGAAAGCAACTTGAACATGTTCCTAATATATCTCAAGAAATACATGGAGCTAGAGTGCATGAAGGTGATTGGGAAAATGTTGGTTCTGTCAAACATTGGGAATATACAATAGAAGGAAAAAAACAAAGTGCTAAAGAAAAAATTGAGACTATAGATGATGAGAATAAGTTAATCACATATAGTGTCTTTGATGGGGAAGTGAGTGAGAATTACAAGAGTTTAAATGTGACATTTCAAGTGATTGATAAGGAACATGGTGGTGGGATTGTGAAGTGGATCTTTGAATATGAGAAGGTAAAGGAGGATATTACAGGTGTGTCTCCAGAAGCATACTTGGCCTTTGCTGAAAAGGTTACAAAGGATATTGATGCTCATCTTGTCAAAGAATAG 462 0.3615 MSLTGKVESETEIAATAAKFYHVFRKQLEHVPNISQEIHGARVHEGDWENVGSVKHWEYTIEGKKQSAKEKIETIDDENKLITYSVFDGEVSENYKSLNVTFQVIDKEHGGGIVKWIFEYEKVKEDITGVSPEAYLAFAEKVTKDIDAHLVKE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04544 153 SMART Bet_v_1_2 2 153 IPR000916 GO:0006952
Vivi4g04544 153 SUPERFAMILY Bet v1-like 5 152 - -
Vivi4g04544 153 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 152 - -
Vivi4g04544 153 Pfam Pathogenesis-related protein Bet v 1 family 3 153 IPR000916 GO:0006952
Vivi4g04544 153 Gene3D - 1 153 IPR023393 -
Vivi4g04544 153 CDD Bet_v1-like 5 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04544 Vivi-Chr4 172878311 172879420 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04544 - - gmx:100527699 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04544 4 172878311 172879420 Vivi4g04544 4 172878311 172879420 ECH