Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04469 ATGCACTTTCTTCTAAAACTCCTTTTGTGCTTAAGCATTCTATACATCAATATGGCTTCTTCTTCATCACATAGAAAACAATTAGAGAAAGCAATGCGTGAAATTGGGAGTGGAATGATGTTATCAACTGCAGCTGCTGTTTTCATCAATGGGGCCCTAAGTCAGATTACTCGCCCTGGAAAATTCCCATCTCCACTTTTTCCAATTGAAGTTAAGAATATCAAACTAGGCAAACATGGCAGTGACACTGGAGTCTATGATAGTGAAGGAAGATTTGTTGAATCAAAGTTTGAAGAAATTTTCATCAAACATGCACATACACATCCAAATGCTTTAACACATGATGAGCTCGATGAGTTGATCAAAACAAACAGAGAGCCTCAAGATATCCAAGGAAGAATTGGGGGTTTTGTTGAATGGGAAGTTCTTTACACACTTGCTAAAGACAAGAATGGTTTACTTCAGAAAGAAACAATTCGTGGTGTTTACGATGGAAGCTTGTTTGAAGTCCTCAAAAAAGAACATTCAAAGACAATTAATTCAGCCTAG 549 0.3716 MHFLLKLLLCLSILYINMASSSSHRKQLEKAMREIGSGMMLSTAAAVFINGALSQITRPGKFPSPLFPIEVKNIKLGKHGSDTGVYDSEGRFVESKFEEIFIKHAHTHPNALTHDELDELIKTNREPQDIQGRIGGFVEWEVLYTLAKDKNGLLQKETIRGVYDGSLFEVLKKEHSKTINSA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04469 182 PANTHER PEROXYGENASE 3-RELATED 30 178 IPR007736 -
Vivi4g04469 182 Pfam Caleosin related protein 30 171 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04469 Vivi-Chr4 171759876 171762892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04469 31 176 Acyl Lipid Metabolism Gene Families AT1G70680 65.753 1.67e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04469 K17991 - gmx:100799842 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04469 4 171759876 171762892 Vivi4g04469 4 171759876 171762892 ECH