Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04273 ATGCAAAGCCCAGGAACAACACAACCTCAATGGTCTTCTTCTTCTTCTTCTTCACTCTCATTTCTCTCATCAACCTTATTCAGAGACCCTAAACCCAAACCAATCCTCTACACTTTCCTAGTCATCTCTCTCTTCTCCATCCTCCTCATCCTTTCTCTCTCCTCTTCCTCCCCTTCCCAAACCCACACCCGACCCGACCCATTTCTCTACCCCACTCACCAAACCCACCGCATCATCTACGACCAAGATAAAACCGCTCCTCCACCTCCTTCCATAGCGTACCTCATCTCCGGGTCAAAGGGTGATTCGGGTCGGATCTTACGGTTACTTTCTGCAACCTATCACCCTCTCAATCACTACCTCCTTCACCTTGACCCTTCTGCCCCTCATTCAGATCGTGAGAATTTGGCTCTTGTTGTTCAGTCTAATCCCATTTTTAAAGCTGCTCAGAATGTTCATGTTATGGGAAAACCTGATTTTGCTTATGAGAAAGGGTCTTCTCCTGTTTCTTTTACTCTTCATGCTGCTTCCATTTTGATTCGTTTGTCTATTAATTGGGATTGGTTTGTTAGCCTCAGTGCTGATTCTTATCCTCTTGTTACTCAAGATGATCTTCTCCACATCCTGTCGTTTCTGCCTAAAGATATGAACTTTGTGAATCATTCAAGCTATATTGGGTGGAAAGAGTCGAGGAAGTTGAAACCCATTATTGTTGATCCTGGTTTGTATCTTTCTGAAGGGACTGAAATGTTTTATGCTACTCAGAAAAGGGAACTTCCCAGTGCTTACCACTTGTTTACAGGTTCATCTTTTTCTATTTTAAGTCGCAACTTTATGGAGTTTTGCATTTGGGGTGTAGACAACCTCCCAAGGATTCTACTGATGTATTTCTCGAACACACCATCATCCCTGTCCAACTATTTCCCCACCGTTCTCTGCAATTCTCGACAATTCAACAAAACAATCATAAACCAGGACTTATTATATGCTATTTATGACAGTCATAGAAATGATCTTCGACCGTTGAACTCAACAGATTTTGATGACATGATTCATAGTGGAGCTGCCTTTGCTAAAAAATTCCAGCCAGATGATCCCGTGCTTGATCTCATAGACCAGAAAGTATTGGACCGAAGCCCTGGATCGGTTGTTCCTGGTGGTTGGTGTTTAGGTGAGCCCGGGAACAACACATGTTTAACTTGGGGTGATGCCAGTATCTTGAGACCCGGTGTAGGTTCTCAACGACTCGAGAAAGCAATTGTTGAACTGTTGTCGAATGGCACTTTCCGATCTCGTCAGTGTATATAG 1308 0.435 MQSPGTTQPQWSSSSSSSLSFLSSTLFRDPKPKPILYTFLVISLFSILLILSLSSSSPSQTHTRPDPFLYPTHQTHRIIYDQDKTAPPPPSIAYLISGSKGDSGRILRLLSATYHPLNHYLLHLDPSAPHSDRENLALVVQSNPIFKAAQNVHVMGKPDFAYEKGSSPVSFTLHAASILIRLSINWDWFVSLSADSYPLVTQDDLLHILSFLPKDMNFVNHSSYIGWKESRKLKPIIVDPGLYLSEGTEMFYATQKRELPSAYHLFTGSSFSILSRNFMEFCIWGVDNLPRILLMYFSNTPSSLSNYFPTVLCNSRQFNKTIINQDLLYAIYDSHRNDLRPLNSTDFDDMIHSGAAFAKKFQPDDPVLDLIDQKVLDRSPGSVVPGGWCLGEPGNNTCLTWGDASILRPGVGSQRLEKAIVELLSNGTFRSRQCI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04273 435 PANTHER GLYCOSYLTRANSFERASE 35 434 IPR044610 GO:0015020
Vivi4g04273 435 Pfam Core-2/I-Branching enzyme 92 333 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04273 Vivi-Chr4 168927585 168933057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04273 64 435 Glycosyltransferase AT3G24040 64.533 6.79e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04273 - - gmx:100811397 664.455