Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04261 ATGTCATTTCTTGAAGAATTTCAAGCCAATTTGGATTCACTGCCCAATATTCTTCATAAGAAATATGCCTTGTTGCGTGACCTAGATAAGAGTTTACAAGATAATCAAAGGCAAAATGAACAGCGCTGTGAGCAAGAAATTGAAGATATTCGGCGAGGAGTTAGGTCTGGAAACATCACACCTGATGTTTCAGTTATTAGATTATCTGATGAAGCACTTGATGAACAAAAGCATAGCATCAGGATTGCTGATGAAAAAGTTGCCTTGGCTGTCCAAGCATATGATTTGGTAGATACACACATACAACAACTTGATCAATATCTGAAAAAGTTTGATGAGGAGCTTCGGCGTGAAAGAGAAAATGCTGCAATGACTGGAGTGCCTGCTTCAAGCACAGACGGCAACATAAAATCTGGAAAGAGTGAAGGTGGTAGAGGAGGCAGGAAAAAAACACGGCAAACAGCATCTGTCCAAACTGCAATAGCAGCAGCAACTGCAGCAGCAGCAGAACTAGCCACATCTGCAAACCCTACTGGCATGGATTTAGATTTACCGGTTGATCCGAATGAACCCACATATTGCTTTTGCAACCAAGTTAGCTACGGAGAAATGGTTGCCTGTGATAACCCTGATTGCAAAATAGAGTGGTTTCATTTTGGTTGTGTTGGCCTGAAAGAACAGCCAAAAGGAAAATGGTTCTGTTCAAGTTGTGCAGCAACAAGAAATCGTCGGAGAGGCAAATGA 744 0.4167 MSFLEEFQANLDSLPNILHKKYALLRDLDKSLQDNQRQNEQRCEQEIEDIRRGVRSGNITPDVSVIRLSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKKFDEELRRERENAAMTGVPASSTDGNIKSGKSEGGRGGRKKTRQTASVQTAIAAATAAAAELATSANPTGMDLDLPVDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEQPKGKWFCSSCAATRNRRRGK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04261 247 Coils Coil 101 121 - -
Vivi4g04261 247 Pfam Inhibitor of growth proteins N-terminal histone-binding 3 111 IPR024610 -
Vivi4g04261 247 SMART PHD_3 193 238 IPR001965 -
Vivi4g04261 247 SUPERFAMILY FYVE/PHD zinc finger 181 240 IPR011011 -
Vivi4g04261 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 185 241 IPR013083 -
Vivi4g04261 247 SMART ING_2 3 111 IPR024610 -
Vivi4g04261 247 CDD PHD_Yng1p_like 193 239 - -
Vivi4g04261 247 CDD ING_plant 13 108 - -
Vivi4g04261 247 MobiDBLite consensus disorder prediction 120 156 - -
Vivi4g04261 247 Gene3D - 2 108 - -
Vivi4g04261 247 ProSiteProfiles Zinc finger PHD-type profile. 191 240 IPR019787 -
Vivi4g04261 247 PANTHER INHIBITOR OF GROWTH PROTEIN 2 123 IPR028651 -
Vivi4g04261 247 FunFam Inhibitor of growth protein 184 241 - -
Vivi4g04261 247 ProSitePatterns Zinc finger PHD-type signature. 194 237 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04261 Vivi-Chr4 168792933 168796737 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04261 - - cam:101508756 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04261 4 168792933 168796737 Vivi4g04261 4 168792933 168796737 ECH