Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03934 ATGGCTTCTTCTTCTTCTTCGCCTTCGCCCGAGGAGCAATGCGGAGCTGAGGTTTCTGATAATTATGAGACGACTTGCTGGGGATGTGGACTGCGCGTTATGCTTCCGTCATGTGCATCTATTTTCAAATGTGGTTGGTGTGGGGCCATTACAGATCATAACAAAAAGAAACGTGATGAAAAGTGCGTTGGGTGGAGACTACTGCGTGATCGATGCTTTCTTTCTGTTGTCCTAGTATTTATGTTCTTTGTAATATTTGGTGGGGTGTGGGCAGTGTACCCTGTAGTCTTCTCTGTCAGTCTTCTTTGGGGAATTTTTCACTCAATCATTACAACAATTTTGTCCATAGCTACACTTTCCTTTTTCAGCCTTGCAGCATTTAGATGTGCTGGGACACCACCAAATATATTATGGGGAAGCTACCCCACGGTAGGGAAAGGCGACCTTGAAAATTATACATTCTGTCAATACTGCTTGAAGCCAAAGTCACCTAGAGCACATCATTGCCGTTCATGTGGAAAATGTATACTGGACATGGATCATCACTGCCCATTTATTGGGAATTGTGTTGGTGCAGCTAATCACTACAGCTTCATGTGCTTCCTCATTTCAGCAGTGGTGAGCACAATCTATGTCTCTATAATGTCTGCATATGCTAGCTTGCATATTTGGCCACCATCATCATACTCCCTCGGACGCTTAAAGGGGCTTACTGGCCGAGATCTAGCATGGAGATTGTTGAATGAAATTTTTATTGCCTTCCTGAGATCTGCGTTGTTTCTATCGTCTAGAGGACTTCTTCTTGTGTATCTGTTTATCGCAAGTGTTTCATTGCAGATAGGATTGAGTGTTCTTTTATGGCAGCAGCTCTCTTTTATCTATCAGGGAAAAACTTTTCTGAGTAACTTAAGTTCACAGGCAGATAATGACGAAGAAGAAAAGAAAGATTGCCAAAATCTTGTTAGATTTTTTGGTTTACAACATTCTGTATCAAGATTTTTGTCTTACTTTCGTGTTACTAGGAAGAGGCACGACACATAA 1041 0.4179 MASSSSSPSPEEQCGAEVSDNYETTCWGCGLRVMLPSCASIFKCGWCGAITDHNKKKRDEKCVGWRLLRDRCFLSVVLVFMFFVIFGGVWAVYPVVFSVSLLWGIFHSIITTILSIATLSFFSLAAFRCAGTPPNILWGSYPTVGKGDLENYTFCQYCLKPKSPRAHHCRSCGKCILDMDHHCPFIGNCVGAANHYSFMCFLISAVVSTIYVSIMSAYASLHIWPPSSYSLGRLKGLTGRDLAWRLLNEIFIAFLRSALFLSSRGLLLVYLFIASVSLQIGLSVLLWQQLSFIYQGKTFLSNLSSQADNDEEEKKDCQNLVRFFGLQHSVSRFLSYFRVTRKRHDT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03934 346 Coils Coil 300 320 - -
Vivi4g03934 346 PANTHER PALMITOYLTRANSFERASE ZDHHC16 71 316 - -
Vivi4g03934 346 ProSiteProfiles DHHC domain profile. 153 203 - -
Vivi4g03934 346 Pfam DHHC palmitoyltransferase 152 299 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03934 Vivi-Chr4 160170094 160175423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03934 99 214 Lipid Metabolism Gene Families AT4G22750 35.345 1.14e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03934 - - gmx:100792359 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03934 4 160170094 160175423 Vivi4g03934 4 160170094 160175423 ECH