Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03867 ATGTCAGAGGTTTACACTGTCAAGGTTGAGGAAGGAATGCCTGCTACATCTGATGGAAAGCCATCTGTAGGCCCTGTATATAGATGCATTTATGCTAAAGATGGTCTTTTGGAGTTGCCTTCTGGTTTAGAGTCCCCTTGGGATTTCTTCAGGGATTCTGTTAAGAGGAACCCGGACAACCAAATGCTTGGAAGACGTCAAAAACTCGATTCTAAAGCGGGACCATATTCATGGCTCACGTATAAAGAGGTCTATGATGCTTCCATCCAAATGGGATCAGCCATGAGAAGTCGTGGTGTCAATCCTGGAGATCATTGTGGCATATATGGTGCCAACTGTCCTGAATGGGTCATTGCAATGGAGGCTTGCAATTGCTCTGCAGTAACATATGTTCCATTGTATGACACCCTTGGTCCTAATGCTGTGGAGTTTATAATAAACCATGCTGAAGTTTCAATCGCATTTGTTCAAGAAAATAAGATTCCATCAATTTTGTCATGTCTTGATCGGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAATGTTTCAGCCACACAAAAGAAGGAAGCTGAGGAATTTGGCACATCCTGCTTCTCCTGGGACGAGTTTCTCCAGTTGGGAAGTTTAGAATGGGATCTACCACCAAAAAAAAAGACTGACATTTGCACAATAATGTACACAAGTGGAACAACCGGAGAACCAAAAGGTGTCCTTATTAAGAATGAGGCTTTCATGTCTGAAGTGTTGTCTATTGATCAAATTATCATGTTAACAGACAGAGTGGCTGCAGACGACGATATATACTTCTCCTTTCTTCCTCTTGCTCATGTATACGACCAGATAATGGCGACCTATTGCATCTTCAAGGGCTCCTCAATAGGATTTTGGCAAGGCGATGTTAGATTCTTGATGGACGATGTTCAGGCATTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTTTGATCGTATTTGCTCCGGTATCAAAAGCAAAGTTTCATCTGCTGGATCAATCAAAAGTGCATTGTTTCATTATGCATACAACTATAAGTTAAGTTACCTGGAGAAGGGTCTTCAACAGCATAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGATAAGACAAAACAAGCACTCGGTGGACGTGTTCGTATCCTATTATCAGGAGCTGCTCCTTTGCCTATACATGTGGAAGAGTGTTTGAGAGTCACTAGTGGATCCACATTATCACAAGGATATGGTCTTACTGAAAGCTGTGCCGGGTGTTTCACATCGATTGGCGATGTGTTTTCTATGATAGGAACAGTTGGAATTCCCATGACAACCATTGAGGCCAGACTTGAATCTGTACCAGAGATGGGATATGATGCACTTTCCAGTGAACCCCGCGGGGAAATTTGCCTGAGAGGAAATTCATTGTTCTCTGGTTACCACAAGCGACAAGATCTTACTCAAGAGGTTATTGTCGATGGTTGGTTTCATACAGGCGATATCGGAGAATGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAAAAGAACATCTTTAAATTGTCTCAAGGAGAATACATTGCTGTAGAGAATATTGAAAGCAAGTATCTGCAATGCCCTCTTATAACATCGATTTGGGTATATGGGAACAGTTTCGAGTCATTCTTGGTGGCTGTGGTGGTTCCTGAAAGAAAGGTTCTTGAGGATTGGGCAGTAGAGCATAACTTTACTGGCGACTTTAAATCTGTGTGCGAAAATTTAAAGGCAAGAAAATACATTTTGGATGAGCTCAGAAGCACTGGTCAGAAACTCCAACTTAGGGGATTTGAGCTGCTCAAAGCTATTTATCTGGAACCATCTCCCTTTGACATAGAGAGAGATCTAGTAACTCCAACATTCAAATTGAAGAGACCTCAATTACTGAAATACTACAAGGATCAAGTTGATGAACTTTACAAGGAAGCAAAAGGAACAATGGCATGA 1986 0.4129 MSEVYTVKVEEGMPATSDGKPSVGPVYRCIYAKDGLLELPSGLESPWDFFRDSVKRNPDNQMLGRRQKLDSKAGPYSWLTYKEVYDASIQMGSAMRSRGVNPGDHCGIYGANCPEWVIAMEACNCSAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQENKIPSILSCLDRCSSNLKTIVSFGNVSATQKKEAEEFGTSCFSWDEFLQLGSLEWDLPPKKKTDICTIMYTSGTTGEPKGVLIKNEAFMSEVLSIDQIIMLTDRVAADDDIYFSFLPLAHVYDQIMATYCIFKGSSIGFWQGDVRFLMDDVQALKPTIFCGVPRVFDRICSGIKSKVSSAGSIKSALFHYAYNYKLSYLEKGLQQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPIHVEECLRVTSGSTLSQGYGLTESCAGCFTSIGDVFSMIGTVGIPMTTIEARLESVPEMGYDALSSEPRGEICLRGNSLFSGYHKRQDLTQEVIVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIESKYLQCPLITSIWVYGNSFESFLVAVVVPERKVLEDWAVEHNFTGDFKSVCENLKARKYILDELRSTGQKLQLRGFELLKAIYLEPSPFDIERDLVTPTFKLKRPQLLKYYKDQVDELYKEAKGTMA 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03867 661 CDD LC-FACS_euk 74 654 IPR045311 GO:0004467|GO:0006631
Vivi4g03867 661 Gene3D - 41 515 IPR042099 -
Vivi4g03867 661 Pfam AMP-binding enzyme 50 523 IPR000873 -
Vivi4g03867 661 Pfam AMP-binding enzyme C-terminal domain 533 574 IPR025110 -
Vivi4g03867 661 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
Vivi4g03867 661 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 653 - -
Vivi4g03867 661 SUPERFAMILY Acetyl-CoA synthetase-like 43 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03867 Vivi-Chr4 158174146 158178649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03867 5 657 Acyl Lipid Metabolism Gene Families AT1G64400 55.505 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03867 K01897 - gmx:100795926 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03867 4 158174146 158178649 Vivi4g03867 4 158174146 158178649 ECH