Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03864 ATGGTTTCTTTTCTAAGAAAGTTTAGAACTTCTTCTGTTCCTCCTATGGAAACAGAAGATAGCATTAATAGTAGTAACTTTGAATATTCTTTTGCTGTTGTTTACACTGGTCCTCCTCTTGATCATTCAATCCCTGAAATACCTACTTTCAAAGTTGATCAAGTTCCAATTGCTTCCATAGCTCCTTCTCTTTCTCATGATTTCAAAGTACCTGTTATTCAACCACTTGGTAAACTTCATCACAAGAATAAGCTCAAACACAAAAGAGCCACTTCAGATTCTACTGTTTATCCTAATTCAGAATCTCATGTAGTTGAAATTGAAGCATCAGAAAGTGATGTTCATGTTCATGTTCATGTTGATTTGAATGAGTATGAGAGTGGAGTTGTTGACGATGTTCCTACAAATTCTGATACAACAGAATCAGGTTCTGGTTCTGGTTCTGGTTTAGGGTTTAGGACTTCTGAGATTTGTTCAATAAGTGAAGAAGAAGAAGAAATAGTTAAAACAAAACATGTTAAACAGCCCTCGGCGGTTACATTCTGCGACCCCGACTCAAATTGCGTGGTGGAAATCGAAAGTAACGAGTATTTTGATTCTCGCAATGTAAGTGTACCTGTGAAGCCACATGCAATTAGACCAGCAAAAAAAGGGTCTTGTTATAGGTGTCTTAAAGGGAATAGTTTAACTGAGAGAGAGGTTTGTATTGTTTGTAGTGCAAAGTATTGTAGATATTGTGTGATAAAAGCAATGGGAGATATGCCGGAAGGAAGGAAATGTGTTGGTTGCATTGGTTATGGAATTGATGAGAGTAAAAGAAGGAAGCTTGGTAAATGTTCTAGGATGATGAAACAGTTGTGGTCTGAGAATATAGATCAAATTATGGAATATGAAAGGCTTTGTGAAGCTAATCAAATTCCACCCGAGCTTATTCAAGTTAACTCGCAAAGACTTAATCGAGAACAACTTAAGTTGTTGCTTCATTGTGCTCATCCTCCAAAAGATCTTAAACCGGGATCTTATTGGTATGATAAAGCTTCTGGATTTTGGGGAAAGAAAGGTCAACCACCTTGTGAAATTATCAGCCCCCAGTTGGACGTTGGCGGTCGTTTGGAGCAAAATGCAAGCGACGGAAACACAAACGTGATGATAAATGATCGTGTGATTACTAAAAAAGAGATGTTGATACTAAAGATGGCAGGAGTACCATGTGAAGGAACTCCACACTTTTGGGTTAGTCCTGATGGATCGTACCGCGAAGAAGGACAAAAGAACGACAGGGGACGCATATGGGAAAAGGTCGGAACAAAGGTTGCTTGTGCTATTCTTTCACTGCCAGTTCCTTCGAAATCTGCGTCTCTTAATGATGAAGTTGAAACAGCTAAGAAACTCAGCCTTCATAAGAAAGGACTTCAAAATATTTTACTCGTCGGTTGTGTCAACTCTGGAGCATGCACTATATTTAAGCAGGCAAAGCTTTTATATAATGCTCCTTTCTCCGAAAACGAGCTTCAAAATATCAAGTTGGTGATTCAAAGCAACCTGTTTACCTACCTTGGTATACTCCTGGAGGCGCGCGAGGGTTTCGAAGAAGAGAGTTTGCGAGAAAATAGGAAAAGATTGCCTTCTGATGAGTCCACATCATCAGGCGAAAATGTTGATACAACAACACCCTATTCAATTGGTCAAAGACTGAAAGGTTTCTCCGATTGGTTACTCAAATGCATGCTGTCAGGTAACATGGATGCAATATTTCCAGCTGCGATACGCGAATACGGGCCAATGGTAGAGGATTTGTGGAGGAACGAGGCGATTCAGGCGACATACAACAGGAGAAACGAACTAAAAACGCTACCTAGAAGCGCTAACTATTTTCTAGACAGGGCTATTGAAATTTCCAAGATAGATTACGAACCCTCTGATATGGACATCTTATATGCCGAGGGGATGTCATTACCCAACAGCCTCACATCAATGGAGTTTTCATTTCCAAAGTCAAGCAGAGAGGAGTCTTTGCATCCCGATTATCAACACGATTCTTCTCTCAGATATCAACTCATCAGAGTACATCCTAACAGTCTTGGAGTAAACTGCAAGTGGTTGGAGATGTTCGAAGACACCGATGTCGTTTTATTCTCTGTCTCCTTAACCGACTATGACGAGTACATTGTAGACAGCAAAGGAGTTTCTACAAACAAAATGTTGGTATCGAAAAACCTATTTGAAAACATCATCGATCATCCAACTTTCAAGAAGAAGAAATTTGTCTTGATACTCACCAAATTTGATCTTCTAGAGGAAAAGATTGAGCATGTTCCACTAAAAAAGTGTGAATGGTTTTCTGACTTCAATCCAGTTACAAGCCACGGTAAAAGAAAAAGTGGTAATGGTAACATTGGAACTATGCCATCATTGGCTCAAAGTGCTTTTCAATACATTGCTACAAAGTTTAAGAGATTGTTCCATTCTTTCACCGAAAGAATTCTATTTGTTTCTTTGGTCACTGGATTGGAACCTGATACGATTGATGAAGCTCTTAGATATGGTAGAGAGGTTATAGAATGGGAAAAATGGGATCCTTCTGTTGTTAATGAGAAGTCTGAGGTTACTTCAACAAGTGTTGATGAGGCAAGTTCTTCATAA 2643 0.392 MVSFLRKFRTSSVPPMETEDSINSSNFEYSFAVVYTGPPLDHSIPEIPTFKVDQVPIASIAPSLSHDFKVPVIQPLGKLHHKNKLKHKRATSDSTVYPNSESHVVEIEASESDVHVHVHVDLNEYESGVVDDVPTNSDTTESGSGSGSGLGFRTSEICSISEEEEEIVKTKHVKQPSAVTFCDPDSNCVVEIESNEYFDSRNVSVPVKPHAIRPAKKGSCYRCLKGNSLTEREVCIVCSAKYCRYCVIKAMGDMPEGRKCVGCIGYGIDESKRRKLGKCSRMMKQLWSENIDQIMEYERLCEANQIPPELIQVNSQRLNREQLKLLLHCAHPPKDLKPGSYWYDKASGFWGKKGQPPCEIISPQLDVGGRLEQNASDGNTNVMINDRVITKKEMLILKMAGVPCEGTPHFWVSPDGSYREEGQKNDRGRIWEKVGTKVACAILSLPVPSKSASLNDEVETAKKLSLHKKGLQNILLVGCVNSGACTIFKQAKLLYNAPFSENELQNIKLVIQSNLFTYLGILLEAREGFEEESLRENRKRLPSDESTSSGENVDTTTPYSIGQRLKGFSDWLLKCMLSGNMDAIFPAAIREYGPMVEDLWRNEAIQATYNRRNELKTLPRSANYFLDRAIEISKIDYEPSDMDILYAEGMSLPNSLTSMEFSFPKSSREESLHPDYQHDSSLRYQLIRVHPNSLGVNCKWLEMFEDTDVVLFSVSLTDYDEYIVDSKGVSTNKMLVSKNLFENIIDHPTFKKKKFVLILTKFDLLEEKIEHVPLKKCEWFSDFNPVTSHGKRKSGNGNIGTMPSLAQSAFQYIATKFKRLFHSFTERILFVSLVTGLEPDTIDEALRYGREVIEWEKWDPSVVNEKSEVTSTSVDEASSS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03864 880 FunFam Extra-large guanine nucleotide-binding protein 3 500 648 - -
Vivi4g03864 880 Gene3D - 645 861 IPR027417 -
Vivi4g03864 880 FunFam Guanine nucleotide-binding protein subunit alpha 678 840 - -
Vivi4g03864 880 PRINTS Alpha G protein (transducin) signature 637 659 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 PRINTS Alpha G protein (transducin) signature 473 488 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 PRINTS Alpha G protein (transducin) signature 707 735 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 PRINTS Alpha G protein (transducin) signature 755 764 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 ProSiteProfiles G-alpha domain profile. 470 869 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 MobiDBLite consensus disorder prediction 533 558 - -
Vivi4g03864 880 MobiDBLite consensus disorder prediction 129 150 - -
Vivi4g03864 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 847 IPR027417 -
Vivi4g03864 880 Gene3D - 500 644 IPR011025 GO:0007165
Vivi4g03864 880 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 251 856 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 MobiDBLite consensus disorder prediction 130 150 - -
Vivi4g03864 880 SUPERFAMILY Transducin (alpha subunit), insertion domain 499 647 IPR011025 GO:0007165
Vivi4g03864 880 Pfam G-protein alpha subunit 454 848 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi4g03864 880 SMART galpha_1 452 837 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03864 Vivi-Chr4 158055950 158060315 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03864 - - tpra:123902613 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03864 4 158055950 158060315 Vivi4g03864 4 158055950 158060315 ECH